@article {4277,
	title = {Infernal 1.0: inference of RNA alignments.},
	journal = {Bioinformatics},
	volume = {25},
	year = {2009},
	month = {2009 May 15},
	pages = {1335-7},
	abstract = {<p>SUMMARY: INFERNAL builds consensus RNA secondary structure profiles called covariance models (CMs), and uses them to search nucleic acid sequence databases for homologous RNAs, or to create new sequence- and structure-based multiple sequence alignments. AVAILABILITY: Source code, documentation and benchmark downloadable from http://infernal.janelia.org. INFERNAL is freely licensed under the GNU GPLv3 and should be portable to any POSIX-compliant operating system, including Linux and Mac OS/X.</p>
},
	keywords = {Databases, Nucleic Acid, Nucleic Acid Conformation, RNA, Sequence Alignment, Sequence Analysis, Software},
	issn = {1367-4811},
	doi = {10.1093/bioinformatics/btp157},
	author = {Nawrocki, Eric P and Kolbe, Diana L and Eddy, Sean R.}
}
