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2024
Garner D, Kind E, Lai JYuet Ha, Nern A, Zhao A, Houghton L, Sancer G, Wolff T, Rubin GM, Wernet MF et al..  2024.  Connectomic reconstruction predicts visual features used for navigation.. Nature. 634(8032):181-190.
Rehman A, Zhovmer A, Sato R, Mukoyama Y, Chen J, Rissone A, Puertollano R, Vishwasrao H, Shroff H, Combs CA et al..  2024.  Convolutional Neural Network Transformer (CNNT) for Fluorescence Microscopy image Denoising with Improved Generalization and Fast Adaptation. arXiv.
Rehman A, Zhovmer A, Sato R, Mukoyama Y, Chen J, Rissone A, Puertollano R, Vishwasrao H, Shroff H, Combs CA et al..  2024.  Convolutional Neural Network Transformer (CNNT) for Fluorescence Microscopy image Denoising with Improved Generalization and Fast Adaptation. arXiv.
Rehman A, Zhovmer A, Sato R, Mukouyama Y-S, Chen J, Rissone A, Puertollano R, Liu J, Vishwasrao HD, Shroff H et al..  2024.  Convolutional neural network transformer (CNNT) for fluorescence microscopy image denoising with improved generalization and fast adaptation.. Sci Rep. 14(1):18184.
Rehman A, Zhovmer A, Sato R, Mukouyama Y-S, Chen J, Rissone A, Puertollano R, Liu J, Vishwasrao HD, Shroff H et al..  2024.  Convolutional neural network transformer (CNNT) for fluorescence microscopy image denoising with improved generalization and fast adaptation.. Sci Rep. 14(1):18184.
Daugird TA, Shi Y, Holland KL, Rostamian H, Liu Z, Lavis LD, Rodriguez J, Strahl BD, Legant WR.  2024.  Correlative single molecule lattice light sheet imaging reveals the dynamic relationship between nucleosomes and the local chromatin environment.. Nat. Commun..
Daugird TA, Shi Y, Holland KL, Rostamian H, Liu Z, Lavis LD, Rodriguez J, Strahl BD, Legant WR.  2024.  Correlative single molecule lattice light sheet imaging reveals the dynamic relationship between nucleosomes and the local chromatin environment.. Nat. Commun..
Patton W, Rhoades JL, Zouinkhi M, Ackerman DG, Malin-Mayor C, Adjavon D, Heinrich L, Bennett D, Zubov Y, Team CMProject et al..  2024.  DaCapo: a modular deep learning framework for scalable 3D image segmentation. arXiv.
Ackerman D, Avetissian E, Bleck CKE, Bogovic JA, Innerberger M, Korff W, Li W-P, Lu Z, Petruncio A, Preibisch S et al..  2024.  Data Release: High-Resolution Imaging and Segmentation of P7 Mouse Tissue Microarchitecture Using FIB-SEM and Machine Learning. bioRxiv.
Team TMouseLight, Ferreira TA, Eddison M, Copeland M, Lay M, Tenshaw E, Weldon M, Schauder D, Olbris DJ, Rokicki K et al..  2024.  Discovery of neuronal cell types by pairing whole cell reconstructions with RNA expression profiles. bioRxiv.
Beltrán FA, L LTorres-Dí, Troncoso-Escudero P, Villalobos-González J, Mayorga-Weber G, Lara M, Covarrubias-Pinto A, Valdivia S, Vicencio I, Papic E et al..  2024.  Distinct roles of ascorbic acid in extracellular vesicles and free form: Implications for metabolism and oxidative stress in presymptomatic Huntington's disease.. Free Radic Biol Med. 227:521-535.
Beltrán FA, L LTorres-Dí, Troncoso-Escudero P, Villalobos-González J, Mayorga-Weber G, Lara M, Covarrubias-Pinto A, Valdivia S, Vicencio I, Papic E et al..  2024.  Distinct roles of ascorbic acid in extracellular vesicles and free form: Implications for metabolism and oxidative stress in presymptomatic Huntington's disease.. Free Radic Biol Med. 227:521-535.
Beltrán FA, L LTorres-Dí, Troncoso-Escudero P, Villalobos-González J, Mayorga-Weber G, Lara M, Covarrubias-Pinto A, Valdivia S, Vicencio I, Papic E et al..  2024.  Distinct roles of ascorbic acid in extracellular vesicles and free form: Implications for metabolism and oxidative stress in presymptomatic Huntington's disease.. Free Radic Biol Med. 227:521-535.
Beltrán FA, L LTorres-Dí, Troncoso-Escudero P, Villalobos-González J, Mayorga-Weber G, Lara M, Covarrubias-Pinto A, Valdivia S, Vicencio I, Papic E et al..  2024.  Distinct roles of ascorbic acid in extracellular vesicles and free form: Implications for metabolism and oxidative stress in presymptomatic Huntington's disease.. Free Radic Biol Med. 227:521-535.
Flierman NA, Koay SAnn, van Hoogstraten WS, Ruigrok TJH, Roelfsema PR, Badura A, De Zeeuw CI.  2024.  Encoding of cerebellar dentate neuronal activity during visual attention in rhesus macaques. bioRxiv.
Flierman NA, Koay SAnn, van Hoogstraten WS, Ruigrok TJH, Roelfsema PR, Badura A, De Zeeuw CI.  2024.  Encoding of cerebellar dentate neuronal activity during visual attention in rhesus macaques. bioRxiv.
Giancola JLB, Grimm JB, Jun JV, Petri YD, Lavis LD, Raines RT.  2024.  Evaluation of the Cytosolic Uptake of HaloTag Using a pH-Sensitive Dye. ACS Chemical Biology.
Goldschmidt D, Guo Y, Chitnis SS, Christoforou C, Turner-Evans D, Ribeiro C, Hermundstad AM, Jayaraman V, Haberkern H.  2024.  Exploration and exploitation are flexibly balanced during local search in flies. bioRxiv.
Ryvkin J, Omesi L, Kim Y-K, Levi M, Pozeilov H, Barak-Buchris L, Agranovich B, Abramovich I, Gottlieb E, Jacob A et al..  2024.  Failure to mate enhances investment in behaviors that may promote mating reward and impairs the ability to cope with stressors via a subpopulation of Neuropeptide F receptor neurons.. PLoS Genetics. 20(1):e1011054.
Wang H, Nikain C, Fortounas KI, Amengual J, Tufanli O, La Forest M, Yu Y, Wang MC, Watts R, Lehner R et al..  2024.  FITM2 deficiency results in ER lipid accumulation, ER stress, and reduced apolipoprotein B lipidation and VLDL triglyceride secretion in vitro and in mouse liver.. Mol Metab. :102048.
Li X, Gamuyao R, Wu M-L, Cho WJung, Kurtz NB, King SV, Petersen R.A., Stabley DR, Lindow C, Climer L et al..  2024.  A fluorogenic complementation tool kit for interrogating lipid droplet-organelle interaction. J. Cell Biol.. 223(9):e202311126.
Robie AA, Taylor AL, Schretter CE, Kabra M, Branson K.  2024.  The Fly Disco: Hardware and software for optogenetics and fine-grained fly behavior analysis. bioRxiv.
Sinclair R, Wang M, Jawaid MZaki, Longkumer T, Aaron J, Rossetti B, Wait E, McDonald K, Cox D, Heddleston J et al..  2024.  Four-dimensional quantitative analysis of cell plate development using lattice light sheet microscopy identifies robust transition points between growth phases.. Journal of Experimental Botany.
Sinclair R, Wang M, Jawaid MZaki, Longkumer T, Aaron J, Rossetti B, Wait E, McDonald K, Cox D, Heddleston J et al..  2024.  Four-dimensional quantitative analysis of cell plate development in Arabidopsis using lattice light sheet microscopy identifies robust transition points between growth phases. J Exp Bot. 75(10):2829-2847.
Biswas T, Stanoev A, Romani S, Fitzgerald JE.  2024.  From the fly connectome to exact ring attractor dynamics. bioRxiv.