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Author Title Type [ Year(Asc)]
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2023
Nanda A, Johnson GW, Mu Y, Ahrens MB, Chang C, Englot DJ, Breakspear M, Rubinov M.  2023.  Time-resolved correlation of distributed brain activity tracks E-I balance and accounts for diverse scale-free phenomena.. Cell Reports. 42(4):112254.
2020
Mu Y, Narayan S, Mensh BD, Ahrens MB.  2020.  Brain-wide, scale-wide physiology underlying behavioral flexibility in zebrafish.. Current Opinion in Neurobiology. 64:151-160.
2019
Mu Y, Bennett DV, Rubinov M, Narayan S, Yang C-T, Tanimoto M, Mensh BD, Looger LL, Ahrens MB.  2019.  Glia accumulate evidence that actions are futile and suppress unsuccessful behavior.. Cell. 178(1):27-43.
2018
Vladimirov N, Wang C, Höckendorf B, Pujala A, Tanimoto M, Mu Y, Yang C-T, Wittenbach J, Freeman J, Preibisch S et al..  2018.  Brain-wide circuit interrogation at the cellular level guided by online analysis of neuronal function.. Nature Methods. 15(12):1117-1125.
Chen X, Mu Y, Hu Y, Kuan AT, Nikitchenko M, Randlett O, Chen AB, Gavornik JP, Sompolinsky H, Engert F et al..  2018.  Brain-wide organization of neuronal activity and convergent sensorimotor transformations in larval zebrafish.. Neuron. 100(4):876-890.e5.
2017
Friedrich J, Yang W, Soudry D, Mu Y, Ahrens MB, Yuste R, Peterka DS, Paninski L.  2017.  Multi-scale approaches for high-speed imaging and analysis of large neural populations.. PLoS Computational Biology. 13(8):e1005685.
2016
Dunn TW, Mu Y, Narayan S, Randlett O, Naumann EA, Yang C-T, Schier AF, Freeman J, Engert F, Ahrens MB.  2016.  Brain-wide mapping of neural activity controlling zebrafish exploratory locomotion.. eLife.
Pnevmatikakis EA, Soudry D, Gao Y, Machado TA, Merel J, Pfau D, Reardon T, Mu Y, Lacefield C, Yang W et al..  2016.  Simultaneous denoising, deconvolution, and demixing of calcium imaging data.. Neuron. 89(2):285-99.
2014
Vladimirov N, Mu Y, Kawashima T, Bennett DV, Yang C-T, Looger LL, Keller PJ, Freeman J, Ahrens MB.  2014.  Light-sheet functional imaging in fictively behaving zebrafish.. Nature Methods. 11(9):883-4.
Freeman J, Vladimirov N, Kawashima T, Mu Y, Sofroniew NJ, Bennett DV, Rosen J, Yang C-T, Looger LL, Ahrens MB.  2014.  Mapping brain activity at scale with cluster computing.. Nature Methods. 11(9):941-950.