Biblio

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Author Title Type [ Year(Desc)]
Filters: Author is Ahrens, Misha B.  [Clear All Filters]
2014
Freeman J, Vladimirov N, Kawashima T, Mu Y, Sofroniew NJ, Bennett DV, Rosen J, Yang C-T, Looger LL, Ahrens MB.  2014.  Mapping brain activity at scale with cluster computing.. Nature Methods. 11(9):941-950.
2016
Dunn TW, Mu Y, Narayan S, Randlett O, Naumann EA, Yang C-T, Schier AF, Freeman J, Engert F, Ahrens MB.  2016.  Brain-wide mapping of neural activity controlling zebrafish exploratory locomotion.. eLife.
2021
Deb D, Jiao Z, Chen AB, Broxton M, Ahrens MB, Podgorski K, Turaga SC.  2021.  Programmable 3D snapshot microscopy with Fourier convolutional networks.
2022
Yang E, Zwart MF, Rubinov M, James B, Wei Z, Narayan S, Vladimirov N, Mensh BD, Fitzgerald JE, Ahrens MB.  2022.  A brainstem integrator for self-localization and positional homeostasis. Cell. 185(26):5011-5027.e20.
2024
Fiore A, Yu G, Northey JJ, Patel R, Ravenscroft TA, Ikegami R, Kolkman W, Kumar P, Grimm JB, Dilan TL et al..  2024.  Imaging the extracellular matrix in live tissues and organisms with a glycan-binding fluorophore. bioRxiv.
Chen AB, Duque M, Wang VM, Dhanasekar M, Mi X, Rymbek A, Tocquer L, Narayan S, Prober D, Yu G et al..  2024.  Norepinephrine changes behavioral state via astroglial purinergic signaling. Science.
2025
Petkova MD, Januszewski M, Blakely T, Herrera KJ, Schuhknecht GFP, Tiller R, Choi J, Schalek RL, Boulanger-Weill J, Peleg A et al..  2025.  A connectomic resource for neural cataloguing and circuit dissection of the larval zebrafish brain. bioRxiv.
Tran S, Emtage J, Zhang C, Liu X, Lecoeuche M, Andreev A, Oikonomou G, Narayan S, Garcia B, Cammidge T et al..  2025.  stk32a links sleep homeostasis to suppression of sensory and motor systems. bioRxiv.
Chen W, James B, Ruetten VMS, Banala S, Wei Z, Fleishman G, Rubinov M, Fishman MC, Engert F, Lavis LD et al..  2025.  Whole-brain, all-optical interrogation of neuronal dynamics underlying gut interoception in zebrafish. bioRxiv.
2026
Lim J-X, Wei Z, Narayan S, Zhang Y, Hasseman JP, Kolb I, Zheng J, Sheikhattar A, Mi X, Zheng W et al..  2026.  Astrocyte-induced internal state transitions reshape brainwide sensory, integrative, and motor computations. bioRxiv.
Ruetten VMS, Zheng W, Siwanowicz I, Mensh BD, Eddison M, Hu A, Chi Y, Lemire AL, Guo C, Kadobianskyi M et al..  2026.  Imaging cellular activity simultaneously across all organs of a vertebrate reveals body-wide circuits. Nature.
Zhang R, Wei Z, How JJ, Nardin M, Narayan S, Kinkhabwala A, Chen W, Lim J-X, Ruetten VMS, Rupashinge A et al..  2026.  A neuron-glia circuit anticipates hypoxia to regulate organismal oxygen use. bioRxiv.
Chen W, James B, Ruetten VMS, Banala S, Wei Z, Yang X, Fleishman G, Siwanowicz I, Rubinov M, Delahanty J et al..  2026.  Whole-brain, all-optical interrogation of neuronal dynamics underlying gut and vascular interoception in zebrafish. Nature Communications.
Chen W, James B, Ruetten VMS, Banala S, Wei Z, Yang X, Fleishman G, Siwanowicz I, Rubinov M, Delahanty J et al..  2026.  Whole-brain, all-optical interrogation of neuronal dynamics underlying gut and vascular interoception in zebrafish. Nature Communications.
Legorreta EMarquez, Fleishman GM, Hesselink LW, Eddison M, Smeets K, Stringer C, Keller PJ, Narayan S, Chen AB, Mensh BD et al..  2026.  Whole-brain co-mapping of gene expression and neuronal activity at cellular resolution in behaving zebrafish. bioRxiv.