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An Image Processing Tool for Automated Quantification of Bacterial Burdens in Zebrafish Larvae

Yamaguchi N, Otsuna H, Eisenberg-Bord M, Ramakrishnan L. 2024. An Image Processing Tool for Automated Quantification of Bacterial Burdens in Zebrafish Larvae. bioRxiv.

Cell-surface Milieu Remodeling in Human Dendritic Cell Activation.

Udeshi ND, Xu C, Jiang Z, Gao SMax, Yin Q, Luo W, Carr SA, Davis MM, Li J. 2024. Cell-surface Milieu Remodeling in Human Dendritic Cell Activation.. J Immunol.

A Cell Observatory to reveal the subcellular foundations of life.

Betzig E. 2024. A Cell Observatory to reveal the subcellular foundations of life.. Nat Methods.

DaCapo: a modular deep learning framework for scalable 3D image segmentation

Patton W, Rhoades JL, Zouinkhi M, Ackerman DG, Malin-Mayor C, Adjavon D, Heinrich L, Bennett D, Zubov Y, Team CMProject et al.. 2024. DaCapo: a modular deep learning framework for scalable 3D image segmentation. arXiv.

Decomposing heterogeneous dynamical systems with graph neural networks

Allier C, Schneider MC, Innerberger M, Heinrich L, Bogovic JA, Saalfeld S. 2024. Decomposing heterogeneous dynamical systems with graph neural networks. arXiv.

AIC Through the Years

Submitted by powellr on Wed, 2024-08-14 10:09

Activity-dependent synapse elimination requires caspase-3 activation

Yu Z, Gutu A, Kim N, O’Shea EK. 2025. Activity-dependent synapse elimination requires caspase-3 activation. eLife.

Nanoscale volumetric fluorescence imaging via photochemical sectioning

Wang W, Ruan X, Liu G, Milkie DE, Li W, Betzig E, Upadhyayula S, Gao R. 2024. Nanoscale volumetric fluorescence imaging via photochemical sectioning. bioRxiv.

Convolutional neural network transformer (CNNT) for fluorescence microscopy image denoising with improved generalization and fast adaptation.

Rehman A, Zhovmer A, Sato R, Mukouyama Y-S, Chen J, Rissone A, Puertollano R, Liu J, Vishwasrao HD, Shroff H et al.. 2024. Convolutional neural network transformer (CNNT) for fluorescence microscopy image denoising with improved generalization and fast adaptation.. Sci Rep. 14(1):18184.

Previous arXiv preprint: https://doi.org/10.48550/arXiv.2404.04726

Bridging tuning and invariance with equivariant neuronal representations

Hoeller J, Zhong L, Pachitariu M, Romani S. 2024. Bridging tuning and invariance with equivariant neuronal representations. bioRxiv.