Biblio

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Author Title Type [ Year(Desc)]
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2021
Steinmetz NA, Aydın Ç, Lebedeva A, Okun M, Pachitariu M, Bauza M, Beau M, Bhagat J, Böhm C, Broux M et al..  2021.  Neuropixels 2.0: A miniaturized high-density probe for stable, long-term brain recordings.. Science. 372(6539)
Daie K, Svoboda K, Druckmann S.  2021.  Targeted photostimulation uncovers circuit motifs supporting short-term memory.. Nature Neuroscience. 24(2):259-265.
2022
Inagaki HK, Chen S, Ridder MC, Sah P, Li N, Yang Z, Hasanbegovic H, Gao Z, Gerfen CR, Svoboda K.  2022.  A midbrain-thalamus-cortex circuit reorganizes cortical dynamics to initiate movement.. Cell. 185(8):1065.
Inagaki HK, Chen S, Daie K, Finklestein A, Fontolan L, Romani S, Svoboda K.  2022.  Neural Algorithms and Circuits for Motor Planning.. Annual Reviews Neuroscience.
Inagaki HK, Chen S, Daie K, Finkelstein A, Fontolan L, Romani S, Svoboda K.  2022.  Neural Algorithms and Circuits for Motor Planning.. Annual Review Neuroscience. 45:249-271.
Rubel O, Tritt A, Ly R, Dichter BK, Ghosh S, Niu L, Baker P, Soltesz I, Ng L, Svoboda K et al..  2022.  The Neurodata Without Borders ecosystem for neurophysiological data science.. eLife. 11
2023
Kim CM, Finkelstein A, Chow CC, Svoboda K, Darshan R.  2023.  Distributing task-related neural activity across a cortical network through task-independent connections.. Nature Communications. 14(1):2851.
Zhang Y, Rozsa M, Liang Y, Bushey D, Wei Z, Zheng J, Reep D, Broussard GJoey, Tsang A, Tsegaye G et al..  2023.  Fast and sensitive GCaMP calcium indicators for imaging neural populations.. Nature.
Covert I, Gala R, Wang T, Svoboda K, Sümbül U, Lee S-I.  2023.  Predictive and robust gene selection for spatial transcriptomics.. Nature Communications. 14(1):2091.
Abdelfattah AS, Zheng J, Singh A, Huang Y-C, Reep D, Tsegaye G, Tsang A, Arthur BJ, Rehorova M, Olson CVL et al..  2023.  Sensitivity optimization of a rhodopsin-based fluorescent voltage indicator. Neuron. 111(10):1547-1563.
2024
Chen S, Liu Y, Wang ZAiden, Colonell J, Liu LD, Hou H, Tien N-W, Wang T, Harris T, Druckmann S et al..  2024.  Brain-wide neural activity underlying memory-guided movement.. Cell. 187(3):676-691.e16.
Amsalem O, Inagaki H, Yu J, Svoboda K, Darshan R.  2024.  Sub-threshold neuronal activity and the dynamical regime of cerebral cortex.. Nat Commun. 15(1):7958.
2025
Mohar B, Michel G, Wang Y-Z, Hernandez V, Grimm JB, Park J-Y, Patel R, Clarke M, Brown TA, Bergmann C et al..  2025.  DELTA: A method for brain-wide measurement of synaptic protein turnover reveals localized plasticity during learning.. Nat Neurosci.
Aggarwal A, Negrean A, Chen Y, Iyer R, Reep D, Liu A, Palutla A, Xie ME, MacLennan BJ, Hagihara KM et al..  2025.  Glutamate indicators with increased sensitivity and tailored deactivation rates. Nat Methods.
Pereira-Obilinovic U, Daie K, Chen S, Svoboda K, Darshan R.  2025.  Neural dynamics outside task-coding dimensions drive decision trajectories through transient amplification. bioRxiv.
2026
Finkelstein A, Daie K, Rozsa M, Darshan R, Svoboda K.  2026.  Connectivity underlying motor cortex activity during goal-directed behaviour.. Nature. 649(8096):416-422.
Lakunina A, Socha KZ, Ladd A, Bowen AJ, Chen S, Colonell J, Doshi A, Karsh B, Krumin M, Kulik P et al..  2026.  Neuropixels Opto: Combining high-resolution electrophysiology and optogenetics. Nat Methods.
Rupprecht P, Rozsa M, Fang X, Svoboda K, Helmchen F.  2026.  Spike inference from calcium imaging data acquired with GCaMP8 indicators.. Nat Methods.