Biblio

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Filters: Author is Ahrens, Misha B  [Clear All Filters]
2026
Herrera KJ, Zarghani-Shiraz A, Ahrens MB, Engert F, Fishman MC.  2026.  Synchronization of behavioral and cardiac dynamics in larval zebrafish.. Cell Rep. 45(2):116947.
2025
Zocchi D, Nguyen M, Marquez-Legorreta E, Siwanowicz I, Singh C, Prober DA, Hillman EMC, Ahrens MB.  2025.  Days-old zebrafish rapidly learn to recognize threatening agents through noradrenergic and forebrain circuits.. Curr Biol. 35(1):163-176.e4.
Mi X, Chen ABo-Yuan, Duarte D, Carey E, Taylor CR, Braaker PN, Bright M, Almeida RG, Lim J-X, Ruetten VMS et al..  2025.  Fast, accurate, and versatile data analysis platform for the quantification of molecular spatiotemporal signals.. Cell.
Fiore A, Yu G, Northey JJ, Patel R, Ravenscroft TA, Ikegami R, Kolkman W, Kumar P, Dilan TL, Ruetten VMS et al..  2025.  Live imaging of the extracellular matrix with a glycan-binding fluorophore.. Nat Methods.
Smeets K, Hesselink LW, Marquez-Legorreta E, Fleishman GM, Eddison M, Tillberg PW, Ahrens MB, Englitz B.  2025.  SpotDMix: informed mRNA transcript assignment using mixture models. bioRxiv.
Kawashima T, Wei Z, Haruvi R, Shainer I, Narayan S, Baier H, Ahrens MB.  2025.  Voltage imaging reveals circuit computations in the raphe underlying serotonin-mediated motor vigor learning. Neuron.
2024
Ahrens MB, Khakh BS, Poskanzer KE.  2024.  Astrocyte Calcium Signaling. Cold Spring Harb Perspect Biol.
Ahrens MB.  2024.  Closing the Experiment-Modeling-Perturbation Loop in Whole-Brain Neuroscience.. Neurosci Bull.
Zocchi D, Nguyen M, Marquez-Legorreta E, Siwanowicz I, Singh C, Prober DA, Hillman EMC, Ahrens MB.  2024.  Days-old zebrafish rapidly learn to recognize threatening agents through noradrenergic and forebrain circuits.. Curr Biol.
Duque M, Chen AB, Hsu E, Narayan S, Rymbek A, Begum S, Saher G, Cohen AE, Olson DE, Li Y et al..  2024.  Ketamine induces plasticity in a norepinephrine-astroglial circuit to promote behavioral perseverance.. Neuron. (113):1-15.
2023
Zhang Y, Rozsa M, Liang Y, Bushey D, Wei Z, Zheng J, Reep D, Broussard GJoey, Tsang A, Tsegaye G et al..  2023.  Fast and sensitive GCaMP calcium indicators for imaging neural populations.. Nature.
Nanda A, Johnson GW, Mu Y, Ahrens MB, Chang C, Englot DJ, Breakspear M, Rubinov M.  2023.  Time-resolved correlation of distributed brain activity tracks E-I balance and accounts for diverse scale-free phenomena.. Cell Reports. 42(4):112254.
2022
Böhm UL, Kimura Y, Kawashima T, Ahrens MB, Higashijima S-I, Engert F, Cohen AE.  2022.  Voltage imaging identifies spinal circuits that modulate locomotor adaptation in zebrafish.. Neuron.
Böhm UL, Kimura Y, Kawashima T, Ahrens MB, Higashijima S-I, Engert F, Cohen AE.  2022.  Voltage imaging identifies spinal circuits that modulate locomotor adaptation in zebrafish.. Neuron. 110(7):1211-1222.e4.
2021
Kler S, Ma M, Narayan S, Ahrens MB, Y Pan A.  2021.  Cre-Dependent Anterograde Transsynaptic Labeling and Functional Imaging in Zebrafish Using VSV With Reduced Cytotoxicity.. Frontiers in Neuroanatomy. 15:758350.
2020
Mu Y, Narayan S, Mensh BD, Ahrens MB.  2020.  Brain-wide, scale-wide physiology underlying behavioral flexibility in zebrafish.. Current Opinion in Neurobiology. 64:151-160.
Zarowny L, Aggarwal A, Rutten VMS, Kolb I, Patel R, Huang H-Y, Chang Y-F, Phan T, Kanyo R, Ahrens MB et al..  2020.  Bright and high-performance genetically encoded Ca indicator based on mNeonGreen fluorescent protein.. ACS Sensors.
McRaven C, Tanese D, Zhang L, Yang C-T, Ahrens MB, Emiliani V, Koyama M.  2020.  High-throughput cellular-resolution synaptic connectivity mapping in vivo with concurrent two-photon optogenetics and volumetric Ca2+ imaging. bioRxiv.
Shemesh OA, Linghu C, Piatkevich KD, Goodwin D, Celiker OTunc, Gritton HJ, Romano MF, Gao R, Yu C-CJay, Tseng H-A et al..  2020.  Precision Calcium Imaging of Dense Neural Populations via a Cell-Body-Targeted Calcium Indicator.. Neuron. 107(3):470.
2019
Wee CLei, Song EYue, Johnson REvan, Ailani D, Randlett O, Kim J-Y, Nikitchenko M, Bahl A, Yang C-T, Ahrens MB et al..  2019.  A bidirectional network for appetite control in larval zebrafish.. Elife. 8
Abdelfattah AS, Kawashima T, Singh A, Novak O, Liu H, Shuai Y, Huang Y-C, Campagnola L, Seeman SC, Yu J et al..  2019.  Bright and photostable chemigenetic indicators for extended in vivo voltage imaging.. Science. 365(6454):699-704.
Marvin JS, Shimoda Y, Magloire V, Leite M, Kawashima T, Jensen TP, Kolb I, Knott EL, Novak O, Podgorski K et al..  2019.  A genetically encoded fluorescent sensor for in vivo imaging of GABA.. Nature Methods. 16(8):763-770.
Mu Y, Bennett DV, Rubinov M, Narayan S, Yang C-T, Tanimoto M, Mensh BD, Looger LL, Ahrens MB.  2019.  Glia accumulate evidence that actions are futile and suppress unsuccessful behavior.. Cell. 178(1):27-43.
Ahrens MB.  2019.  Zebrafish neuroscience: Using artificial neural networks to help understand brains.. Current Biology. 29(21):R1138-R1140.
2018
Vladimirov N, Wang C, Höckendorf B, Pujala A, Tanimoto M, Mu Y, Yang C-T, Wittenbach J, Freeman J, Preibisch S et al..  2018.  Brain-wide circuit interrogation at the cellular level guided by online analysis of neuronal function.. Nature Methods. 15(12):1117-1125.