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Project Teams:
- Overview
- Anatomy and Histology
- Cryo-Electron Microscopy
- Electron Microscopy
- Flow Cytometry
- Gene Targeting and Transgenics
- Immortalized Cell Line Culture
- Integrative Imaging
- Invertebrate Shared Resource
- Janelia Experimental Technology
- Mass Spectrometry
- Media Prep
- Molecular Genomics
- Primary & iPS Cell Culture
- Project Pipeline Support
- Project Technical Resources
- Quantitative Genomics
- Scientific Computing Software
- Scientific Computing Systems
- Viral Tools
- Vivarium
2020
Ochiai H, Hayashi T, Umeda M, Yoshimura M, Harada A, Shimizu Y, Nakano K, Saitoh N, Liu Z, Yamamoto T et al..
2020. Genome-wide kinetic properties of transcriptional bursting in mouse embryonic stem cells.. Science Advances. 6(25):eaaz6699.
Liang X, Kokes M, Fetter RD, Sallee MDanielle, Moore AW, Feldman JL, Shen K.
2020. Growth cone-localized microtubule organizing center establishes microtubule orientation in dendrites.. eLife. 9
Molina RS, King J, Franklin J, Clack N, McRaven C, Goncharov V, Flickinger D, Svoboda K, Drobizhev M, Hughes TE.
2020. High throughput instrument to screen fluorescent proteins under two-photon excitation.. Biomedical Optics Express. 11(12):7192-7203.
McRaven C, Tanese D, Zhang L, Yang C-T, Ahrens MB, Emiliani V, Koyama M.
2020. High-throughput cellular-resolution synaptic connectivity mapping in vivo with concurrent two-photon optogenetics and volumetric Ca2+ imaging. bioRxiv.
Gong R, Xu S, Hermundstad A, Yu Y, Sternson SM.
2020. Hindbrain double-negative feedback mediates palatability-guided food and water consumption.. Cell. 182(6):1589-1605.
Wait EC, Reiche MA, Chew T-L.
2020. Hypothesis-driven quantitative fluorescence microscopy - the importance of reverse-thinking in experimental design.. Journal of Cell Science. 133(21)
Schleyer M, Weiglein A, Thoener J, Strauch M, Hartenstein V, Weigelt MKantar, Schuller S, Saumweber T, Eichler K, Rohwedder A et al..
2020. Identification of dopaminergic neurons that can both establish associative memory and acutely terminate its behavioral expression.. Journal of Neuroscience. 40(31):5990-6006.
Masson J-B, Laurent F, Cardona A, Barre C, Skatchkovsky N, Zlatic M, Jovanic T.
2020. Identifying neural substrates of competitive interactions and sequence transitions during mechanosensory responses in Drosophila.. PLoS Genetics. 16(2):e1008589.
Honegger KS, Smith MA-Y, Churgin MA, Turner GC, de Bivort BL.
2020. Idiosyncratic neural coding and neuromodulation of olfactory individuality in Drosophila.. Proceedings of the National Academy of Sciences of the United States of America. 117(38):23292-23297.
Weigel AV, Snapp ELee.
2020. Imaging Cellular Proteins and Structures. The Liver : Biology and Pathobiology. :965-978.
Qian Y, Cosio DMOrozco, Piatkevich KD, Aufmkolk S, Su W-C, Celiker OT, Schohl A, Murdock MH, Aggarwal A, Chang Y-F et al..
2020. Improved genetically encoded near-infrared fluorescent calcium ion indicators for in vivo imaging.. PLoS Biology. 18(11):e3000965.
Thirukkumaran OMargaret, Wang C, Asouzu NJoseph, Fron E, Rocha S, Hofkens J, Lavis LD, Mizuno H.
2020. Improved HaloTag Ligand Enables BRET Imaging With NanoLuc. Frontiers in Chemistry. 7
Gur D, Bain EJ, Johnson KR, Aman AJ, H Pasoili A, Flynn JD, Allen MC, Deheyn DD, Lee JC, Lippincott-Schwartz J et al..
2020. In situ differentiation of iridophore crystallotypes underlies zebrafish stripe patterning.. Nature Communications. 11(1):6391.
Song K, Shang Z, Fu X, Lou X, Grigorieff N, Nicastro D.
2020. In situ structure determination at nanometer resolution using TYGRESS.. Nature Methods. 17(2):201-08.
Wolf S, Hamprecht FA, Funke J.
2020. Inpainting Networks Learn to Separate Cells in Microscopy Images. British Machine Vision Conference.
Otto N, Pleijzier MW, Morgan IC, Edmondson-Stait AJ, Heinz KJ, Stark I, Dempsey G, Ito M, Kapoor I, Hsu J et al..
2020. Input connectivity reveals additional heterogeneity of dopaminergic reinforcement in Drosophila. Current Biology. 30(16):3200-11.
De Zitter E, Hugelier S, Duwé S, Vandenberg W, Tebo AG, Van Meervelt L, Dedecker P.
2020. Integrated structure-function dataset reveals key mechanisms underlying photochromic fluorescent proteins. bioRxiv. :2020.09.25.313528.
Ghilardi SJ, O'Reilly BM, Sgro AE.
2020. Intracellular signaling dynamics and their role in coordinating tissue repair.. Wiley Interdiscip Rev Syst Biol Med. 12(3):e1479.
Mohr MAlexander, Bushey D, Aggarwal A, Marvin JS, Kim JJun, Marquez EJimenez, Liang Y, Patel R, Macklin JJ, Lee C-Y et al..
2020. jYCaMP: an optimized calcium indicator for two-photon imaging at fiber laser wavelengths.. Nature Methods. 17(1):694-97.
Wu J, Liang Y, Chen S, Hsu C-L, Chavarha M, Evans SW, Shi D, Lin MZ, Tsia KK, Ji N.
2020. Kilohertz two-photon fluorescence microscopy imaging of neural activity in vivo.. Nature Methods. 17(3):287-290.
Li B, Bickel RD, Parker BJ, Ziabari OSaleh, Liu F, Vellichirammal NNanoth, Simon J-C, Stern DL, Brisson JA.
2020. A large genomic insertion containing a duplicated follistatin gene is linked to the pea aphid male wing dimorphism.. eLife. 9
Huang GB, Yang H-F, Takemura S-ya, Rivlin P, Plaza SM.
2020. Latent Feature Representation via Unsupervised Learning for Pattern Discovery in Massive Electron Microscopy Image Volumes. arXiv.
Zolnik TA, Ledderose J, Toumazou M, Trimbuch T, Oram T, Rosenmund C, Eickholt BJ, Sachdev RNS, Larkum ME.
2020. Layer 6b Is driven by intracortical long-range projection neurons.. Cell Reports. 30(10):3492-3505.e5.
Mi L, Wang H, Meirovitch Y, Schalek R, Turaga SC, Lichtman JW, Samuel ADT, Shavit N.
2020. Learning Guided Electron Microscopy with Active Acquisition. Medical Image Computing and Computer Assisted Intervention – MICCAI 2020.
Winnubst J, Spruston N, Harris JA.
2020. Linking axon morphology to gene expression: a strategy for neuronal cell-type classification.. Current Opinion in Neurobiology. 65:70-76.