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Cell-type-specific plasticity shapes neocortical dynamics for motor learning

Majumder S, Hirokawa K, Yang Z, Paletzki R, Gerfen CR, Fontolan L, Romani S, Jain A, Yasuda R, Inagaki HK. 2023. Cell-type-specific plasticity shapes neocortical dynamics for motor learning. bioRxiv.

bioRxiv PrePrint https://doi.org/10.1101/2023.08.09.552699

Stimulus edges induce orientation tuning in superior colliculus.

Liang Y, Lu R, Borges K, Ji N. 2023. Stimulus edges induce orientation tuning in superior colliculus.. Nature Communications. 14(1):4756.

Localization of fixed dipoles at high precision by accounting for sample drift during illumination

Hinterer F, Schneider MC, Hubmer S, López-Martínez M, Ramlau R, Schütz GJ. 2023. Localization of fixed dipoles at high precision by accounting for sample drift during illumination. Applied Physics Letters. 123(2)

Network statistics of the whole-brain connectome of Drosophila

Lin A, Yang R, Dorkenwald S, Matsliah A, Sterling AR, Schlegel P, Yu S-chieh, McKellar CE, Costa M, Eichler K et al.. 2024. Network statistics of the whole-brain connectome of Drosophila. Nature. 634(8032):153–165.

bioRxiv Preprint https://doi.org/10.1101/2023.07.29.551086

Rastermap: a discovery method for neural population recordings

Stringer C, Zhong L, Syeda A, Du F, Pachitariu M. 2023. Rastermap: a discovery method for neural population recordings. Nat. Neurosci..

bioRxiv PrePrint https://doi.org/10.1101/2023.07.25.550571

The density of regulatory information is a major determinant of evolutionary constraint on non-coding DNA in Drosophila

Sabarís G, Ortíz DM, Laiker I, Mayansky I, Naik S, Cavalli G, Stern DL, Ben Noon EPreger-, Frankel N. 2024. The density of regulatory information is a major determinant of evolutionary constraint on non-coding DNA in Drosophila. Molecular Biology and Evolution. 41(2):msae004.

bioRxiv PrePrint https://doi.org/10.1101/2023.07.21.550043

Nonlinear manifolds underlie neural population activity during behaviour.

Fortunato C, Bennasar-Vázquez J, Park J, Chang JC, Miller LE, Dudman JT, Perich MG, Gallego JA. 2023. Nonlinear manifolds underlie neural population activity during behaviour.. bioRxiv.

bioRxiv PrePrint https://doi.org/10.1101/2023.07.18.549575

Pinpoint: trajectory planning for multi-probe electrophysiology and injections in an interactive web-based 3D environment

Birman D, Yang KJ, West SJ, Karsh B, Browning Y, Laboratory theInternatio, Siegle JH, Steinmetz NA. 2023. Pinpoint: trajectory planning for multi-probe electrophysiology and injections in an interactive web-based 3D environment. bioRxiv.

bioRxiv PrePrint https://doi.org/10.1101/2023.07.14.548952

Rational Engineering of an Improved Genetically Encoded pH Sensor Based on Superecliptic pHluorin.

Shen Y, Wen Y, Sposini S, Vishwanath AAmrapali, Abdelfattah AS, Schreiter ER, M Lemieux J, de Juan-Sanz J, Perrais D, Campbell RE. 2023. Rational Engineering of an Improved Genetically Encoded pH Sensor Based on Superecliptic pHluorin.. ACS Sensors. 8(8):3014-3022.

Toward scalable reuse of vEM data: OME-Zarr to the rescue.

Rzepka N, Bogovic JA, Moore JA. 2023. Toward scalable reuse of vEM data: OME-Zarr to the rescue.. Methods in Cell Biology. 177:359-387.