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  • Our Research
  • Resources Hub
  • Tools & Data
  • Conferences & Workshops
  • Students & Postdocs at Janelia
Labs:
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Aguilera Castrejon Lab
Ahrens Lab
Aso Lab
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Branson Lab
Dennis Lab
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Espinosa Medina Lab
Feliciano Lab
Harris Lab
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Hess Lab
Ilanges Lab
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Lavis Lab
Li Lab
Lippincott-Schwartz Lab
Liu (Yin) Lab
Liu (Zhe) Lab
O'Shea Lab
Otopalik Lab
Pachitariu Lab
Pedram Lab
Reiser Lab
Romani Lab
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Saalfeld Lab
Satou Lab
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Stringer Lab
Tavakoli Lab
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Tillberg Lab
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Turner Lab
Voigts Lab
Wang (Meng) Lab
Wang (Shaohe) Lab
Wong-Campos Lab
Project Teams:
CellMap
FIB-SEM Technology
Fly Descending Interneuron
Fly-eFISH
FlyEM
FlyLight
FuncEWOrm
GENIE
MouseLight
Tool Translation Team (T3)

Solving the spike sorting problem with Kilosort

Pachitariu M, Sridhar S, Stringer C.  2023.  Solving the spike sorting problem with Kilosort. bioRxiv.

Previous bioRxiv PrePrint https://doi.org/10.1101/2023.01.07.523036

  • Read more about Solving the spike sorting problem with Kilosort
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Exact learning dynamics of deep linear networks with prior knowledge

Braun L, Dominé C, Fitzgerald J, Saxe A.  2022.  Exact learning dynamics of deep linear networks with prior knowledge. Neural Information Processing Systems.
  • Read more about Exact learning dynamics of deep linear networks with prior knowledge
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Neural circuit mechanisms for transforming learned olfactory valences into wind-oriented movement

Aso Y, Yamada D, Bushey D, Hibbard K, Sammons M, Otsuna H, Shuai Y, Hige T.  2023.  Neural circuit mechanisms for transforming learned olfactory valences into wind-oriented movement. eLife.

Previous bioRxiv PrePrint https://doi.org/10.1101/2022.12.21.521497

  • Read more about Neural circuit mechanisms for transforming learned olfactory valences into wind-oriented movement
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Eye structure shapes neuron function in Drosophila motion vision

Zhao A, Gruntman E, Nern A, Iyer NA, Rogers EM, Koskela S, Siwanowicz I, Dreher M, Flynn MA, Laughland CW et al..  2022.  Eye structure shapes neuron function in Drosophila motion vision. bioRxiv.

Previous bioRxiv PrePrint https://doi.org/10.1101/2022.12.14.520178

  • Read more about Eye structure shapes neuron function in Drosophila motion vision
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Neural coding of distinct motor patterns during Drosophila courtship song

Shiozaki HM, Wang K, Lillvis JL, Xu M, Dickson BJ, Stern DL.  2022.  Neural coding of distinct motor patterns during Drosophila courtship song. bioRxiv.

Previous bioRxiv PrePrint https://doi.org/10.1101/2022.12.14.520499

  • Read more about Neural coding of distinct motor patterns during Drosophila courtship song
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Synaptic gradients transform object location to action.

Dombrovski M, Peek MY, Park J-Y, Vaccari A, Sumathipala M, Morrow C, Breads P, Zhao A, Kurmangaliyev YZ, Sanfilippo P et al..  2023.  Synaptic gradients transform object location to action.. Nature. 613(7944):534-42.
  • Read more about Synaptic gradients transform object location to action.
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Behavioral state-dependent modulation of insulin-producing cells in Drosophila.

Liessem S, Held M, Bisen RS, Haberkern H, Lacin H, Bockemühl T, Ache JM.  2023.  Behavioral state-dependent modulation of insulin-producing cells in Drosophila.. Current Biology. 33(3):449.
  • Read more about Behavioral state-dependent modulation of insulin-producing cells in Drosophila.
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Local shape descriptors for neuron segmentation.

Sheridan A, Nguyen TM, Deb D, Lee W-CAllen, Saalfeld S, Turaga SC, Manor U, Funke J.  2023.  Local shape descriptors for neuron segmentation.. Nature Methods. 20(2):295-303.
  • Read more about Local shape descriptors for neuron segmentation.
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In situ cryo-electron tomography reveals the asymmetric architecture of mammalian sperm axonemes.

Chen Z, Greenan GA, Shiozaki M, Liu Y, Skinner WM, Zhao X, Zhao S, Yan R, Yu Z, Lishko PV et al..  2023.  In situ cryo-electron tomography reveals the asymmetric architecture of mammalian sperm axonemes.. Nature Structural & Molecular Biology. 30(3):360-9.
  • Read more about In situ cryo-electron tomography reveals the asymmetric architecture of mammalian sperm axonemes.
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Time-tagged ticker tapes for intracellular recordings.

Lin D, Li X, Moult E, Park P, Tang B, Shen H, Grimm JB, Falco N, Jia BZ, Baker D et al..  2023.  Time-tagged ticker tapes for intracellular recordings.. Nature Biotechnology. 41(5):631-9.
  • Read more about Time-tagged ticker tapes for intracellular recordings.
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