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Quantitative Attributions with Counterfactuals

Adjavon D-Y, Eckstein N, Bates AS, Jefferis GSXE, Funke J. 2024. Quantitative Attributions with Counterfactuals. bioRxiv.

Quantitative Spatial Analysis of Chromatin Biomolecular Condensates using Cryo-Electron Tomography

Zhou H, Hutchings J, Shiozaki M, Zhao X, Doolittle LK, Yang S, Yan R, Jean N, Riggi M, Yu Z et al.. 2024. Quantitative Spatial Analysis of Chromatin Biomolecular Condensates using Cryo-Electron Tomography. bioRxiv.

Structural dynamics of human ribosomes in situ reconstructed by exhaustive high-resolution template matching.

J Rickgauer P, Choi H, Moore AS, Denk W, Lippincott-Schwartz J. 2024. Structural dynamics of human ribosomes in situ reconstructed by exhaustive high-resolution template matching.. Mol Cell.

Global Neuron Shape Reasoning with Point Affinity Transformers

Troidl J, Knittel J, Li W, Zhan F, Pfister H, Turaga S. 2024. Global Neuron Shape Reasoning with Point Affinity Transformers. bioRxiv.

Whole-body simulation of realistic fruit fly locomotion with deep reinforcement learning

Vaxenburg R, Siwanowicz I, Merel J, Robie AA, Morrow C, Novati G, Stefanidi Z, Both G-J, Card GM, Reiser MB et al.. 2024. Whole-body simulation of realistic fruit fly locomotion with deep reinforcement learning. bioRxiv.

Genomes of two invasive Adelges species (hemlock woolly adelgid and pineapple gall adelgid) enable characterization of nicotinic acetylcholine receptors

Glendening AM, Stephens C, Vuruputoor VS, Stern DL, Hogenhout SA, Mathers TC, Chaganti T, Pauloski N, Cernak TA, Wegrzyn JL et al.. 2024. Genomes of two invasive Adelges species (hemlock woolly adelgid and pineapple gall adelgid) enable characterization of nicotinic acetylcholine receptors. bioRxiv.

A novel rhodopsin-based voltage indicator for simultaneous two-photon optical recording with GCaMP in vivo

Villette V, Yang S, Valenti R, Macklin JJ, Bradley J, Mathieu B, Lombardini A, Podgorski K, Dieudonné S, Schreiter ER et al.. 2024. A novel rhodopsin-based voltage indicator for simultaneous two-photon optical recording with GCaMP in vivo. bioRxiv.

Tracking fructose 1,6-bisphosphate dynamics in liver cancer cells using a fluorescent biosensor

Pérez-Chávez I, Koberstein JN, Pueyo JMalo, Gilglioni EH, Vertommen D, Baeyens N, Ezeriņa D, Gurzov EN, Messens J. 2024. Tracking fructose 1,6-bisphosphate dynamics in liver cancer cells using a fluorescent biosensor. iScience. 27:111336.

TUDCA modulates drug bioavailability to regulate resistance to acute ER stress in Saccharomyces cerevisiae

Chadwick SR, Stack-Couture S, Berg MD, Di Gregorio S, Lung B, Genereaux J, Moir RD, Brandl CJ, Willis IM, Snapp EL et al.. 2024. TUDCA modulates drug bioavailability to regulate resistance to acute ER stress in Saccharomyces cerevisiae. Mol Biol Cell. :mbcE24040147.

Previous bioRxiv preprint: https://doi.org/10.1101/2024.11.14.623614

ONIX: a unified open-source platform for multimodal neural recording and perturbation during naturalistic behavior.

Newman JP, Zhang J, Cuevas-López A, Miller NJ, Honda T, van der Goes M-SH, Leighton AH, Carvalho F, Lopes G, Lakunina A et al.. 2024. ONIX: a unified open-source platform for multimodal neural recording and perturbation during naturalistic behavior.. Nat Methods.

bioRxiv Preprint: https://doi.org/10.1101/2023.08.30.554672