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Computational methods for stitching, alignment, and artifact correction of serial section data.

Saalfeld S. 2019. Computational methods for stitching, alignment, and artifact correction of serial section data.. Methods in Cell Biology. 152:261-276.

The fly brain atlas.

Scheffer LK, Meinertzhagen IA. 2019. The fly brain atlas.. Annual Review of Cell and Developmental Biology. 35:637-53.

Analysis of phosphatidylinositol transfer at ER-PM junctions in receptor-stimulated live cells.

Chang C-L, Liou J. 2019. Analysis of phosphatidylinositol transfer at ER-PM junctions in receptor-stimulated live cells.. Methods in Molecular Biology. 1949:1-11.

CHP1 regulates compartmentalized glycerolipid synthesis by activating GPAT4.

Zhu XGe, Puthenveedu SNicholson, Shen Y, La K, Ozlu C, Wang T, Klompstra D, Gultekin Y, Chi J, Fidelin J et al.. 2019. CHP1 regulates compartmentalized glycerolipid synthesis by activating GPAT4.. Molecular Cell. 74(1):45-58.e7.

A genetically encoded fluorescent sensor for in vivo imaging of GABA.

Marvin JS, Shimoda Y, Magloire V, Leite M, Kawashima T, Jensen TP, Kolb I, Knott EL, Novak O, Podgorski K et al.. 2019. A genetically encoded fluorescent sensor for in vivo imaging of GABA.. Nature Methods. 16(8):763-770.

bioRxiv PrePrint https://doi.org/10.1101/322578 (May 14, 2018)

Cellular level analysis of the locomotor neural circuits in Drosophila melanogaster.

minegishi ryo, Feng K, Dickson B. 2019. Cellular level analysis of the locomotor neural circuits in Drosophila melanogaster.. Biomimetic and Biohybrid Systems. :334-7.

State-dependent decoupling of sensory and motor circuits underlies behavioral flexibility in Drosophila.

Ache JM, Namiki S, Lee A, Branson K, Card GM. 2019. State-dependent decoupling of sensory and motor circuits underlies behavioral flexibility in Drosophila.. Nature Neuroscience. 22(7):1132-1139.

Sparse LMS via online linearized Bregman iteration.

Hu T, Chklovskii DB. 2014. Sparse LMS via online linearized Bregman iteration.. ICASSP 2014 - 2014 IEEE International Conference on Acoustics, Speech and Signal Processing (ICASSP)2014 IEEE International Conference on Acoustics, Speech and Signal Processing (ICASSP).

Previously published as an arXiv PrePrint

Multiplicative updates for optimization problems with dynamics.

Kazemipour A, Babadi B, wu min, Podgorski K, Druckmann S. 2018. Multiplicative updates for optimization problems with dynamics.. IEEE Xplore.

Previously published on December 15, 2017 as bioRxiv PrePrint https://dx.doi.org/10.1101/234526

A Hebbian/Anti-Hebbian network derived from online non-negative matrix factorization can cluster and discover sparse features.

Pehlevan C, Chklovskii DB. 2014. A Hebbian/Anti-Hebbian network derived from online non-negative matrix factorization can cluster and discover sparse features.. 2014 48th Asilomar Conference on Signals, Systems and Computers2014 48th Asilomar Conference on Signals, Systems and Computers.

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