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2025
Aggarwal A, Negrean A, Chen Y, Iyer R, Reep D, Liu A, Palutla A, Xie ME, MacLennan BJ, Hagihara KM et al..  2025.  Glutamate indicators with increased sensitivity and tailored deactivation rates. bioRxiv.
Podgorski K, Aggarwal A, Negrean A, Chen Y, Iyer R, Reep D, Liu A, Palutla A, Xie M, Maclennan B et al..  2025.  Glutamate indicators with increased sensitivity and tailored deactivation rates. Research Square.
Hou X, Li Y, Hobson CM, Shroff H, Guo M, Liu H.  2025.  HD2Net: A Deep Learning Framework for Simultaneous Denoising and Deaberration in Fluorescence Microscopy. bioRxiv.
Hou X, Li Y, Hobson CM, Shroff H, Guo M, Liu H.  2025.  HD2Net: A Deep Learning Framework for Simultaneous Denoising and Deaberration in Fluorescence Microscopy. bioRxiv.
Zhu Z, Gong R, Rodriguez V, Quach KT, Chen X, Sternson SM.  2025.  Hedonic eating is controlled by dopamine neurons that oppose GLP-1R satiety.. Science. 387(6741):eadt0773.
Kim J, Liu ZJ.  2025.  High-resolution imaging of RNA and proteins in thick tissues using cycleHCR.. Nat Rev Genet.
Almeida JA, Avila DB, Longmore GD, Pathak A.  2025.  History of hypoxia exposure aids future cell invasion according to cell type and collagen density.. Mol Biol Cell. :mbcE24120580.
Rokicki K, Schauder D, Olbris DJ, Goina C, Clements J, Edson P, Kawase T, Svirskas R, Arshadi C, Feng D et al..  2025.  HortaCloud: An Open and Collaborative Platform for Whole Brain Neuronal Reconstructions. bioRxiv.
Kolb I, Hasseman JP, Matsumoto A, Arthur BJ, Zhang Y, Tsang A, Reep D, Tsegaye G, Zheng J, Patel R et al..  2025.  iGABASnFR2: Improved genetically encoded protein sensors of GABA. bioRxiv.
Chen T-W, Bin Huang X-, Plutkis SE, Holland KL, Lavis LD, Lin B-J.  2025.  Imaging neuronal voltage beyond the scattering limit. Nat Methods.
Zheng Y, Cai R, Wang K, Zhang J, Zhuo Y, Dong H, Zhang Y, Wang Y, Deng F, Ji E et al..  2025.  In vivo multiplex imaging of dynamic neurochemical networks with designed far-red dopamine sensors. Science.
Trautmann EM, Hesse JK, Stine GM, Xia R, Zhu S, O'Shea DJ, Karsh B, Colonell J, Lanfranchi FF, Vyas S et al..  2025.  Large-scale high-density brain-wide neural recording in nonhuman primates.. Nat Neurosci.
Sun W, Winnubst J, Natrajan M, Lai C, Kajikawa K, Michaelos M, Gattoni R, Stringer C, Flickinger D, Fitzgerald JE et al..  2025.  Learning produces an orthogonalized state machine in the hippocampus.. Nature. 640
Chiossi HSC, Nardin M, Tkačik G, Csicsvari JL.  2025.  Learning reshapes the hippocampal representation hierarchy. Proc. Natl. Acad. Sci. U.S.A..
Fiore A, Yu G, Northey JJ, Patel R, Ravenscroft TA, Ikegami R, Kolkman W, Kumar P, Dilan TL, Ruetten VMS et al..  2025.  Live imaging of the extracellular matrix with a glycan-binding fluorophore.. Nat Methods.
Zhang Q, Dang W, Wang MC.  2025.  Lysosomes Signal through Epigenome to Regulate Longevity across Generations. bioRxiv.
Zhang Q, Dang W, Wang MC.  2025.  Lysosomes Signal through Epigenome to Regulate Longevity across Generations. bioRxiv.
Banuelos A, Baez M, Zhang A, Yılmaz L, Kasberg W, Volk R, Georgeos N, Koren-Sedova E, Le U, Burden AT et al..  2025.  Macrophages release neuraminidase and cleaved calreticulin for programmed cell removal.. Proc Natl Acad Sci U S A. 122(21):e2426644122.
Patel TP, Jun JYun, Seo AY, Levi NJ, Elizondo DM, Chen J, Wong AM, Tugarinov N, Altman EK, Gehle DB et al..  2025.  Melanocortin 3 receptor regulates hepatic autophagy and systemic adiposity.. Nat Commun. 16(1):1690.
Nakamura K, Aoyama-Ishiwatari S, Nagao T, Paaran M, Obara CJ, Sakurai-Saito Y, Johnston J, Du Y, Suga S, Tsuboi M et al..  2025.  Mitochondrial complexity is regulated at ER-mitochondria contact sites via PDZD8-FKBP8 tethering.. Nat Commun. 16(1):3401.
Krasley AT, Chakraborty S, Vuković L, Beyene AG.  2025.  Molecular Determinants of Optical Modulation in ssDNA–Carbon Nanotube Biosensors. ACS Nano.
Rosenthal JS, Zhang D, Yin J, Long C, Yang G, Li Y, Lu Z, Li W-P, Yu Z, Li J et al..  2025.  Molecular organization of central cholinergic synapses.. Proc Natl Acad Sci U S A. 122(17):e2422173122.
Mao S, Song R, Jin S, Pang S, Jovanovic A, Zimmerman A, Li P, Wu X, Wendland MF, Lin K et al..  2025.  Multicilia dynamically transduce Sonic Hedgehog signaling to regulate choroid plexus functions. Cell Reports.
Fu T-M, Liu G, Milkie DE, Ruan X, Görlitz F, Shi Y, Ferro V, Divekar NS, Wang W, York HM et al..  2025.  A Multimodal Adaptive Optical Microscope For In Vivo Imaging from Molecules to Organisms. bioRxiv.
Close K, He Y, Jeter J, Ihrke G, Eddison M.  2025.  Multiplex Detection of Gene Expression in the Intact Drosophila Brain Using Expansion-Assisted Iterative Fluorescence In Situ Hybridization.. J Vis Exp. (219)