Biblio

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2024
Hadas R, Rubinstein H, Mittnenzweig M, Mayshar Y, Ben-Yair R, Cheng S, Aguilera-Castrejon A, Reines N, Orenbuch A-H, Lifshitz A et al..  2024.  Temporal BMP4 effects on mouse embryonic and extraembryonic developmentAbstract. Nature. 634(8034):652-661.
Hadas R, Rubinstein H, Mittnenzweig M, Mayshar Y, Ben-Yair R, Cheng S, Aguilera-Castrejon A, Reines N, Orenbuch A-H, Lifshitz A et al..  2024.  Temporal BMP4 effects on mouse embryonic and extraembryonic developmentAbstract. Nature. 634(8034):652-661.
Renganathan B, Moore AS, Yeo W-H, Petruncio A, Ackerman D, Wiegel A, Team CM, H. Pasolli A, C. Xu S, Hess HF et al..  2024.  Transport and Organization of Individual Vimentin Filaments Within Dense Networks Revealed by Single Particle Tracking and 3D FIB-SEM. bioRxiv.
Ye Z, Shelton AM, Shaker JR, Boussard JM, Colonell J, Birman D, Manavi S, Chen S, Windolf C, Hurwitz C et al..  2024.  Ultra-high density electrodes improve detection, yield, and cell type identification in neuronal recordings. bioRxiv.
Ye Z, Shelton AM, Shaker JR, Boussard JM, Colonell J, Birman D, Manavi S, Chen S, Windolf C, Hurwitz C et al..  2024.  Ultra-high density electrodes improve detection, yield, and cell type identification in neuronal recordings. bioRxiv.
Vaxenburg R, Siwanowicz I, Merel J, Robie AA, Morrow C, Novati G, Stefanidi Z, Both G-J, Card GM, Reiser MB et al..  2024.  Whole-body simulation of realistic fruit fly locomotion with deep reinforcement learning. bioRxiv.
Vaxenburg R, Siwanowicz I, Merel J, Robie AA, Morrow C, Novati G, Stefanidi Z, Both G-J, Card GM, Reiser MB et al..  2024.  Whole-body simulation of realistic fruit fly locomotion with deep reinforcement learning. bioRxiv.
2023
Selfe JS, Steyn TJS, Shorer EF, Burman RJ, Düsterwald KM, Abdelfattah AS, Schreiter ER, Newey SE, Akerman CJ, Raimondo JV.  2023.  All-optical reporting of chloride ion driving force in the nervous system. bioRxiv.
Selfe JS, Steyn TJS, Shorer EF, Burman RJ, Düsterwald KM, Abdelfattah AS, Schreiter ER, Newey SE, Akerman CJ, Raimondo JV.  2023.  All-optical reporting of inhibitory receptor driving force in the nervous system.. bioRxiv.
Chen C-L, Aymanns F, Minegishi R, Matsuda VDV, Talabot N, Günel S, Dickson BJ, Ramdya P.  2023.  Ascending neurons convey behavioral state to integrative sensory and action selection centers in the brain. Nature Neuroscience.
Santos ÁDos, Rollins DE, Hari-Gupta Y, McArthur H, Du M, Ru SYong Zi, Pidlisna K, Stranger A, Lorgat F, Lambert D et al..  2023.  Autophagy receptor NDP52 alters DNA conformation to modulate RNA polymerase II transcription.. Nature Communications. 14(1):2855.
Santos ÁDos, Rollins DE, Hari-Gupta Y, McArthur H, Du M, Ru SYong Zi, Pidlisna K, Stranger A, Lorgat F, Lambert D et al..  2023.  Autophagy receptor NDP52 alters DNA conformation to modulate RNA polymerase II transcription.. Nature Communications. 14(1):2855.
Manubens-Gil L, Zhou Z, Chen H, Ramanathan A, Liu X, Liu Y, Bria A, Gillette T, Ruan Z, Yang J et al..  2023.  BigNeuron: a resource to benchmark and predict performance of algorithms for automated tracing of neurons in light microscopy datasets.. Nature Methods. 20(6)
Manubens-Gil L, Zhou Z, Chen H, Ramanathan A, Liu X, Liu Y, Bria A, Gillette T, Ruan Z, Yang J et al..  2023.  BigNeuron: a resource to benchmark and predict performance of algorithms for automated tracing of neurons in light microscopy datasets.. Nature Methods. 20(6)
Manubens-Gil L, Zhou Z, Chen H, Ramanathan A, Liu X, Liu Y, Bria A, Gillette T, Ruan Z, Yang J et al..  2023.  BigNeuron: a resource to benchmark and predict performance of algorithms for automated tracing of neurons in light microscopy datasets.. Nature Methods. 20(6)
Manubens-Gil L, Zhou Z, Chen H, Ramanathan A, Liu X, Liu Y, Bria A, Gillette T, Ruan Z, Yang J et al..  2023.  BigNeuron: a resource to benchmark and predict performance of algorithms for automated tracing of neurons in light microscopy datasets.. Nature Methods. 20(6)
Manubens-Gil L, Zhou Z, Chen H, Ramanathan A, Liu X, Liu Y, Bria A, Gillette T, Ruan Z, Yang J et al..  2023.  BigNeuron: a resource to benchmark and predict performance of algorithms for automated tracing of neurons in light microscopy datasets.. Nature Methods. 20(6)
Manubens-Gil L, Zhou Z, Chen H, Ramanathan A, Liu X, Liu Y, Bria A, Gillette T, Ruan Z, Yang J et al..  2023.  BigNeuron: a resource to benchmark and predict performance of algorithms for automated tracing of neurons in light microscopy datasets.. Nature Methods. 20(6)
Chiu H, Robie AA, Branson KM, Vippa T, Epstein S, Rubin GM, Anderson DJ, Schretter CE.  2023.  Cell type-specific contributions to a persistent aggressive internal state in female Drosophila. bioRxiv.
Chiu H, Robie AA, Branson KM, Vippa T, Epstein S, Rubin GM, Anderson DJ, Schretter CE.  2023.  Cell type-specific contributions to a persistent aggressive internal state in female Drosophila. bioRxiv.
Majumder S, Hirokawa K, Yang Z, Paletzki R, Gerfen CR, Fontolan L, Romani S, Jain A, Yasuda R, Inagaki HK.  2023.  Cell-type-specific plasticity shapes neocortical dynamics for motor learning. bioRxiv.
Cartwright HN, Hobson CM, Chew T-L, Reiche MA, Aaron JS.  2023.  The challenges and opportunities of open-access microscopy facilities.. Journal of Microscopy.
Liu G, Ruan X, Milkie DE, Görlitz F, Mueller M, Hercule W, Kililea A, Betzig E, Upadhyayula S.  2023.  Characterization, Comparison, and Optimization of Lattice Light Sheets. Science Advances.
Oldak B, Wildschutz E, Bondarenko V, Comar M-Y, Zhao C, Aguilera-Castrejon A, Tarazi S, Viukov S, Pham TXuan Ai, Ashouokhi S et al..  2023.  Complete human day 14 post-implantation embryo models from naïve ES cells. Nature.
Oldak B, Wildschutz E, Bondarenko V, Comar M-Y, Zhao C, Aguilera-Castrejon A, Tarazi S, Viukov S, Pham TXuan Ai, Ashouokhi S et al..  2023.  Complete human day 14 post-implantation embryo models from naïve ES cells. Nature.