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Author Title Type [ Year(Asc)]
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2020
Chen H-M, Marques JGarcia, Sugino K, Wei D, Miyares RLinda, Lee T.  2020.  CAMIO: a transgenic CRISPR pipeline to create diverse targeted genome deletions in Drosophila.. Nucleic Acids Research.
Li C, Li X, Bi Z, Sugino K, Wang G, Zhu T, Liu Z.  2020.  Comprehensive transcriptome analysis of cochlear spiral ganglion neurons at multiple ages.. eLife. 9
Lee Y-J, Yang C-P, Miyares RL, Huang Y-F, He Y, Ren Q, Chen H-M, Kawase T, Ito M, Otsuna H et al..  2020.  Conservation and divergence of related neuronal lineages in the central brain.. eLife. 9
Sugino K, Miyares RL, Espinosa-Medina I, Chen H-M, Potter CJ, Lee T.  2020.  Dense reconstruction of elongated cell lineages: overcoming suboptimum lineage encoding and sparse cell sampling. bioRxiv.
2019
Liu L-Y, Long X, Yang C-P, Miyares RL, Sugino K, Singer RH, Lee T.  2019.  Mamo decodes hierarchical temporal gradients into terminal neuronal fate.. Elife. 8
Sugino K, Clark E, Schulmann A, Shima Y, Wang L, Hunt DL, Hooks BM, Traenkner D, Chandrashekar J, Picard S et al..  2019.  Mapping the transcriptional diversity of genetically and anatomically defined cell populations in the mouse brain.. Elife. 8
Sugino K, Garcia-Marques J, Espinosa-Medina I, Lee T.  2019.  Theoretical modeling on CRISPR-coded cell lineages: efficient encoding and optimal reconstruction. bioRxiv.
2018
Yamashita T, Zheng F, Finkelstein D, Kellard Z, Carter R, Rosencrance CD, Sugino K, Easton J, Gawad C, Zuo J.  2018.  High-resolution transcriptional dissection of in vivo Atoh1-mediated hair cell conversion in mature cochleae identifies Isl1 as a co-reprogramming factor.. PLoS Genetics. 14(7):e1007552.
2017
Ren Q, Yang C-P, Liu Z, Sugino K, Mok K, He Y, Ito M, Nern A, Otsuna H, Lee T.  2017.  Stem cell-intrinsic, seven-up-triggered temporal factor gradients diversify intermediate neural progenitors.. Current Biology : CB. 27(9):1303-13.
2016
Cembrowski MS, Wang L, Sugino K, Shields BC, Spruston N.  2016.  Hipposeq: a comprehensive RNA-seq database of gene expression in hippocampal principal neurons.. eLife. 5
Shima Y, Sugino K, Hempel C, Shima M, Taneja P, Bullis JB, Mehta S, Lois C, Nelson SB.  2016.  A mammalian enhancer trap resource for discovering and manipulating neuronal cell types.. eLife. 5
Branco T, Tozer A, Magnus CJ, Sugino K, Tanaka S, Lee AK, Wood JN, Sternson SM.  2016.  Near-perfect synaptic integration by Nav1.7 in hypothalamic neurons regulates body weight.. Cell. 165(7):1749-61.
Cembrowski MS, Bachman JL, Wang L, Sugino K, Shields BC, Spruston N.  2016.  Spatial gene-expression gradients underlie prominent heterogeneity of CA1 pyramidal neurons.. Neuron.
Yang C-P, Fu C-C, Sugino K, Liu Z, Ren Q, Liu L-Y, Yao X, Lee LP, Lee T.  2016.  Transcriptomes of lineage-specific Drosophila neuroblasts profiled by genetic targeting and robotic sorting.. Development (Cambridge, England). 143(3):411-21.
2015
Henry FE, Sugino K, Tozer A, Branco T, Sternson SM.  2015.  Cell type-specific transcriptomics of hypothalamic energy-sensing neuron responses to weight-loss.. eLife. 4
Liu Z, Yang C-P, Sugino K, Fu C-C, Liu L-Y, Yao X, Lee LP, Lee T.  2015.  Opposing intrinsic temporal gradients guide neural stem cell production of varied neuronal fates.. Science (New York, N.Y.). 350(6258):317-20.
2014
Grange P, Bohland JW, Okaty BW, Sugino K, Bokil H, Nelson SB, Ng L, Hawrylycz M, Mitra PP.  2014.  Cell-type-based model explaining coexpression patterns of genes in the brain.. Proceedings of the National Academy of Sciences of the United States of America. 111(14):5397-402.
Sugino K, Hempel CM, Okaty BW, Arnson HA, Kato S, Dani VS, Nelson SB.  2014.  Cell-type-specific repression by methyl-CpG-binding protein 2 is biased toward long genes.. Journal of Neuroscience. 34(38):12877-83.
Tränkner D, Hahne N, Sugino K, Hoon MA, Zuker C.  2014.  Population of sensory neurons essential for asthmatic hyperreactivity of inflamed airways.. Proceedings of the National Academy of Sciences of the United States of America. 111(31):11515-20.
2013
Huang C-C, Sugino K, Shima Y, Guo C, Bai S, Mensh BD, Nelson SB, Hantman AW.  2013.  Convergence of pontine and proprioceptive streams onto multimodal cerebellar granule cells.. eLife. 2:e00400.