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2010
Seelig JD, M Chiappe E, Lott GK, Dutta A, Osborne JE, Reiser MB, Jayaraman V.  2010.  Two-photon calcium imaging from head-fixed Drosophila during optomotor walking behavior.. Nature Methods. 7:535-40.
Vaziri A, Shank CV.  2010.  Ultrafast widefield optical sectioning microscopy by multifocal temporal focusing.. Optics Express. 18(19):19645-55.
Mishchenko Y, Hu T, Spacek J, Mendenhall J, Harris KM, Chklovskii DB.  2010.  Ultrastructural analysis of hippocampal neuropil from the connectomics perspective.. Neuron. 67(6):1009-20.
Peng H, Ruan Z, Long F, Simpson JH, Myers EW.  2010.  VAA3D enables real-time 3D visualization and quantitative analysis of large-scale biological image data sets.. Nature Biotechnology. 28:348-53.
O’Connor DH, Clack NG, Huber D, Komiyama T, Myers EW, Svoboda K.  2010.  Vibrissa-based object localization in head-fixed mice.. The Journal of Neuroscience. 30(5):1947-67.
Triphan T, Poeck B, Neuser K, Strauss R.  2010.  Visual targeting of motor actions in climbing Drosophila.. Current Biology. 20(7):663-8.
M Chiappe E, Seelig JD, Reiser MB, Jayaraman V.  2010.  Walking modulates speed sensitivity in Drosophila motion vision.. Current Biology. 20(16):1470-5.
2009
Meinhardt J, Sachse C, Hortschansky P, Grigorieff N, Fändrich M.  2009.  Abeta(1-40) fibril polymorphism implies diverse interaction patterns in amyloid fibrils.. Journal of Molecular Biology. 386(3):869-77.
Junek S, Chen T-W, Alevra M, Schild D.  2009.  Activity correlation imaging: visualizing function and structure of neuronal populations.. Biophysical Journal. 96(9):3801-9.
Ahammad P, Lobaton E, Sastry S.  2009.  Algebraic approach to recovering topological information in distributed camera networks.. ACM / IEEE International Conference on Information Processing in Sensor Networks.
Liu X, Long F, Peng H, Aerni SJ, Jiang M, Sánchez-Blanco A, Murray JI, Preston E, Mericle B, Batzoglou S et al..  2009.  Analysis of cell fate from single-cell gene expression profiles in C. elegans.. Cell. 139(3):623-33.
Kainmueller D, Hege H-C, Seim H, Heller M, Zachow S.  2009.  Automatic Extraction of Anatomical Landmarks From Medical Image Data: An Evaluation of Different Methods.
Kainmueller D, Lamecker H, Seim H, Zinser M, Zachow S.  2009.  Automatic extraction of mandibular nerve and bone from cone-beam CT data.. Medical image computing and computer-assisted intervention : MICCAI ... International Conference on Medical Image Computing and Computer-Assisted Intervention. 12(Pt 2):76-83.
Xie J, Khan S, Shah M.  2009.  Automatic tracking of Escherichia coli in phase-contrast microscopy video.. IEEE Transactions on Bio-Medical Engineering. 56(2):390-9.
Preibisch S, Saalfeld S, Rohlfing T, Tomancak P.  2009.  Bead-based mosaicing of single plane illumination microscopy images using geometric local descriptor matching.. Medical Imaging 2009: Image Processing. 7259:72592S.
Harnett MT, Chen W, Smith SM.  2009.  Calcium-sensing receptor: a high-affinity presynaptic target for aminoglycoside-induced weakness.. Neuropharmacology. 57(5-6):502-5.
Saalfeld S, Cardona A, Hartenstein V, Tomancak P.  2009.  CATMAID: collaborative annotation toolkit for massive amounts of image data.. Bioinformatics. 25(15):1984-6.
Fuller CW, Middendorf LR, Benner SA, Church GM, Harris T, Huang X, Jovanovich SB, Nelson JR, Schloss JA, Schwartz DC et al..  2009.  The challenges of sequencing by synthesis.. Nature Biotechnology. 27:1013-23.
Fuller CW, Middendorf LR, Benner SA, Church GM, Harris T, Huang X, Jovanovich SB, Nelson JR, Schloss JA, Schwartz DC et al..  2009.  The challenges of sequencing by synthesis.. Nature Biotechnology. 27:1013-23.
Denver RJ, Hopkins PM, McCormick SD, Propper CR, Riddiford L, Sower SA, Wingfield JC.  2009.  Comparative endocrinology in the 21st century.. Integrative and Comparative Biology. 49(4):339-48.
Heimann T, van Ginneken B, Styner MA, Arzhaeva Y, Aurich V, Bauer C, Beck A, Becker C, Beichel R, Bekes G et al..  2009.  Comparison and evaluation of methods for liver segmentation from CT datasets.. IEEE transactions on medical imaging. 28(8):1251-65.
Heimann T, van Ginneken B, Styner MA, Arzhaeva Y, Aurich V, Bauer C, Beck A, Becker C, Beichel R, Bekes G et al..  2009.  Comparison and evaluation of methods for liver segmentation from CT datasets.. IEEE transactions on medical imaging. 28(8):1251-65.
Heimann T, van Ginneken B, Styner MA, Arzhaeva Y, Aurich V, Bauer C, Beck A, Becker C, Beichel R, Bekes G et al..  2009.  Comparison and evaluation of methods for liver segmentation from CT datasets.. IEEE transactions on medical imaging. 28(8):1251-65.
Heimann T, van Ginneken B, Styner MA, Arzhaeva Y, Aurich V, Bauer C, Beck A, Becker C, Beichel R, Bekes G et al..  2009.  Comparison and evaluation of methods for liver segmentation from CT datasets.. IEEE transactions on medical imaging. 28(8):1251-65.
Heimann T, van Ginneken B, Styner MA, Arzhaeva Y, Aurich V, Bauer C, Beck A, Becker C, Beichel R, Bekes G et al..  2009.  Comparison and evaluation of methods for liver segmentation from CT datasets.. IEEE transactions on medical imaging. 28(8):1251-65.