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- Overview
- Anatomy and Histology
- Cryo-Electron Microscopy
- Electron Microscopy
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- Immortalized Cell Line Culture
- Integrative Imaging
- Invertebrate Shared Resource
- Janelia Experimental Technology
- Mass Spectrometry
- Media Prep
- Molecular Genomics
- Primary & iPS Cell Culture
- Project Pipeline Support
- Project Technical Resources
- Quantitative Genomics
- Scientific Computing Software
- Scientific Computing Systems
- Viral Tools
- Vivarium
HaloCaMP: Chemigenetic Calcium Indicators Using HaloTag and Janelia Fluor Dyes
A Modular Calcium Imaging Platform with Far-Red Brightness
Overview
HaloCaMP integrates circularly permuted HaloTag proteins with a range of Janelia Fluor (JF) dyes to form bright, modular calcium indicators for in vitro and in-cell imaging. This chemigenetic system offers far-red imaging, rapid labeling, and customizable readouts for neuroscience and cell biology.
Key Benefits
- Red and Far-Red Imaging
- Enables imaging beyond GFP’s spectral range, compatible with deep-tissue setups.
- Multiple JF Dye Options
- JF585 (orange): Highest ΔF/F₀ (~23× in vitro)
- JF635, JF639 (far-red): Bright and neuron-compatible
- JF629, JF630: Sensitive with low baseline for improved contrast
- Neuron-Ready
- Expressed in hippocampal cultures and capable of reporting single action potentials.
Performance Highlights
Dye |
Color |
ΔF/F₀ |
Notes |
JF585 |
Orange |
23.2 |
Highest ΔF/F₀ in vitro |
JF635 |
Far-Red |
5–9 |
Strong neuronal performance |
JF629 |
Far-Red |
Moderate |
Best with HaloCaMP1a |
JF630 |
Far-Red |
Moderate |
Best with HaloCaMP1b |
Applications
- Calcium imaging in primary neurons
- Customizable in vitro or in vivo indicators
- Voltage and other biosensing (HASAP, HArclight variants)
- Compatible with expanding dye palettes and multiplexed imaging
Reference: Deo C, Abdelfattah AS, et al. Nat Chem Biol. 2021 Jun;17(6):718-723.
IP Coverage: US Patents 11,708,397 and 12,275,767
Tech ID: 2018-016
Available for non-profit use via Addgene and commercial licensing at innovation@janelia.hhmi.org.