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HaloCaMP: Chemigenetic Calcium Indicators Using HaloTag and Janelia Fluor Dyes

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HaloCaMP: Chemigenetic Calcium Indicators Using HaloTag and Janelia Fluor Dyes

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A Modular Calcium Imaging Platform with Far-Red Brightness

Overview

HaloCaMP integrates circularly permuted HaloTag proteins with a range of Janelia Fluor (JF) dyes to form bright, modular calcium indicators for in vitro and in-cell imaging. This chemigenetic system offers far-red imaging, rapid labeling, and customizable readouts for neuroscience and cell biology.


Key Benefits

  • Red and Far-Red Imaging
    • Enables imaging beyond GFP’s spectral range, compatible with deep-tissue setups.
  • Multiple JF Dye Options
    • JF585 (orange): Highest ΔF/F₀ (~23× in vitro)
    • JF635, JF639 (far-red): Bright and neuron-compatible
    • JF629, JF630: Sensitive with low baseline for improved contrast
  • Neuron-Ready
    • Expressed in hippocampal cultures and capable of reporting single action potentials.

Performance Highlights

Dye

Color

ΔF/F₀

Notes

JF585  

   Orange

    23.2

Highest ΔF/F₀ in vitro

JF635

   Far-Red

    5–9

Strong neuronal performance

JF629

   Far-Red

    Moderate

Best with HaloCaMP1a

JF630

   Far-Red   

    Moderate   

Best with HaloCaMP1b


Applications

  • Calcium imaging in primary neurons
  • Customizable in vitro or in vivo indicators
  • Voltage and other biosensing (HASAP, HArclight variants)
  • Compatible with expanding dye palettes and multiplexed imaging

Reference: Deo C, Abdelfattah AS, et al. Nat Chem Biol. 2021 Jun;17(6):718-723. 

IP Coverage: US Patents 11,708,397 and 12,275,767

Tech ID: 2018-016

Available for non-profit use via Addgene and commercial licensing at innovation@janelia.hhmi.org.

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Fluorescence image of rat hippocampal neurons in culture expressing chemigenetic calcium indicator and labeled with JF635-HaloTag ligand.
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