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2025
Desissaire S, Ziemczonok M, Cantat-Moltrecht T, Kuś A, Godefroy G, Hervé L, Paviolo C, Krauze W, Allier C, Mandula O et al..  2025.  Bio-inspired 3D-printed phantom: Encoding cellular heterogeneity for characterization of quantitative phase imaging. Measurement. 247:116765.
Aaron JS, Jacobs CA, Malacrida L, Keppler A, French P, Fletcher DA, Wood C, Brown CM, Wright GD, Ogawa S et al..  2025.  Challenges of microscopy technology dissemination to resource-constrained communities.. Nat Methods.
Deb D, Both G-J, Bezzam E, Kohli A, Yang S, Chaware A, Allier C, Cai C, Anderberg G, M. Eybposh H et al..  2025.  Chromatix: a differentiable, GPU-accelerated wave-optics library. bioRxiv.
Deb D, Both G-J, Bezzam E, Kohli A, Yang S, Chaware A, Allier C, Cai C, Anderberg G, M. Eybposh H et al..  2025.  Chromatix: a differentiable, GPU-accelerated wave-optics library. bioRxiv.
Park J, Polidoro P, Fortunato C, Arnold J, Mensh B, Gallego JA, Dudman JT.  2025.  Conjoint specification of action by neocortex and striatum. Neuron.
Zocchi D, Nguyen M, Marquez-Legorreta E, Siwanowicz I, Singh C, Prober DA, Hillman EMC, Ahrens MB.  2025.  Days-old zebrafish rapidly learn to recognize threatening agents through noradrenergic and forebrain circuits.. Curr Biol. 35(1):163-176.e4.
Schneider MC, Johnson C, Allier C, Heinrich L, Adjavon D, Husic J, La Riviere P, Saalfeld S, Shroff H.  2025.  DeepPD: Joint Phase and Object Estimation from Phase Diversity with Neural Calibration of a Deformable Mirror. arXiv.
Schneider MC, Johnson C, Allier C, Heinrich L, Adjavon D, Husic J, La Riviere P, Saalfeld S, Shroff H.  2025.  DeepPD: Joint Phase and Object Estimation from Phase Diversity with Neural Calibration of a Deformable Mirror. arXiv.
Park P, Wong-Campos D, Itkis DG, Lee BHun, Qi Y, Davis H, Antin B, Pasarkar A, Grimm JB, Plutkis SE et al..  2025.  Dendritic excitations govern back-propagation via a spike-rate accelerometer. Nature Communications. 16(1)
Wang X, Arpino G, Mohseni A, Bleck CKE, Wu L-G.  2025.  Dense-core vesicles contain exosomes in secretory cells.. Biophys J.
Aaron J, Chew T-L.  2025.  De-risking transformative microscopy technologies for broad adoption.. J Microsc.
Castro P.S, Tomasev N., Anand A., Sharma N., Mohanta R., Perlin K., Jain S., Levin K., Éltető N., Dabney W. et al..  2025.  Discovering Symbolic Cognitive Models from Human and Animal Behavior.. bioRxiv.
Dalangin R, Jia BZ, Qi Y, Aggarwal A, Sakoi K, Drobizhev M, Molina RS, Patel R, Abdelfattah AS, Zheng J et al..  2025.  Far-red fluorescent genetically encoded calcium ion indicators.. Nat Commun. 16(1):3318.
Dalangin R, Jia BZ, Qi Y, Aggarwal A, Sakoi K, Drobizhev M, Molina RS, Patel R, Abdelfattah AS, Zheng J et al..  2025.  Far-red fluorescent genetically encoded calcium ion indicators.. Nat Commun. 16(1):3318.
Mi X, Chen ABo-Yuan, Duarte D, Carey E, Taylor CR, Braaker PN, Bright M, Almeida RG, Lim J-X, Ruetten VMS et al..  2025.  Fast, accurate, and versatile data analysis platform for the quantification of molecular spatiotemporal signals.. Cell.
Mi X, Chen ABo-Yuan, Duarte D, Carey E, Taylor CR, Braaker PN, Bright M, Almeida RG, Lim J-X, Ruetten VMS et al..  2025.  Fast, accurate, and versatile data analysis platform for the quantification of molecular spatiotemporal signals.. Cell.
Moore AS, Krug T, Hansen SB, Ludlow AV, Grimm JB, Ayala AX, Plutkis SE, Wang N, Goldman RD, Medalia O et al..  2025.  FilaBuster: A Strategy for Rapid, Specific, and Spatiotemporally Controlled Intermediate Filament Disassembly. bioRxiv.
Alshaabi T, Milkie D, Liu G, Shirazinejad C, Hong J, Achour K, Görlitz F, Milunovic-Jevtic A, Simmons C, Abuzahriyeh I et al..  2025.  Fourier-Based 3D Multistage Transformer for Aberration Correction in Multicellular Specimens. Research Square.
Alshaabi T, Milkie D, Liu G, Shirazinejad C, Hong J, Achour K, Görlitz F, Milunovic-Jevtic A, Simmons C, Abuzahriyeh I et al..  2025.  Fourier-Based 3D Multistage Transformer for Aberration Correction in Multicellular Specimens. Research Square.
Alshaabi T, Milkie D, Liu G, Shirazinejad C, Hong J, Achour K, Görlitz F, Milunovic-Jevtic A, Simmons C, Abuzahriyeh I et al..  2025.  Fourier-Based 3D Multistage Transformer for Aberration Correction in Multicellular Specimens. Research Square.
Aggarwal A, Negrean A, Chen Y, Iyer R, Reep D, Liu A, Palutla A, Xie ME, MacLennan BJ, Hagihara KM et al..  2025.  Glutamate indicators with increased sensitivity and tailored deactivation rates. bioRxiv.
Aggarwal A, Negrean A, Chen Y, Iyer R, Reep D, Liu A, Palutla A, Xie ME, MacLennan BJ, Hagihara KM et al..  2025.  Glutamate indicators with increased sensitivity and tailored deactivation rates. bioRxiv.
Podgorski K, Aggarwal A, Negrean A, Chen Y, Iyer R, Reep D, Liu A, Palutla A, Xie M, Maclennan B et al..  2025.  Glutamate indicators with increased sensitivity and tailored deactivation rates. Research Square.
Almeida JA, Avila DB, Longmore GD, Pathak A.  2025.  History of hypoxia exposure aids future cell invasion according to cell type and collagen density.. Mol Biol Cell. :mbcE24120580.
Almeida JA, Avila DB, Longmore GD, Pathak A.  2025.  History of hypoxia exposure aids future cell invasion according to cell type and collagen density.. Mol Biol Cell. :mbcE24120580.