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2017
Aitchison L, Russell L, Packer AM, Yan J, Castonguay P, Häusser M, Turaga SC.  2017.  Model-based Bayesian inference of neural activity and connectivity from all-optical interrogation of a neural circuit. Advances in Neural Information Processing Systems.
Friedrich J, Yang W, Soudry D, Mu Y, Ahrens MB, Yuste R, Peterka DS, Paninski L.  2017.  Multi-scale approaches for high-speed imaging and analysis of large neural populations.. PLoS Computational Biology. 13(8):e1005685.
Kieffer-Kwon K-R, Nimura K, Rao SSP, Xu J, Jung S, Pekowska A, Dose M, Stevens E, Mathe E, Dong P et al..  2017.  Myc Regulates Chromatin Decompaction and Nuclear Architecture during B Cell Activation.. Molecular Cell. 67(4):566-78.
Kieffer-Kwon K-R, Nimura K, Rao SSP, Xu J, Jung S, Pekowska A, Dose M, Stevens E, Mathe E, Dong P et al..  2017.  Myc Regulates Chromatin Decompaction and Nuclear Architecture during B Cell Activation.. Molecular Cell. 67(4):566-78.
Tsai A, Muthusamy AK, Alves MRp, Lavis LD, Singer RH, Stern DL, Crocker J.  2017.  Nuclear microenvironments modulate transcription from low-affinity enhancers.. eLife. 6
Almeida-Carvalho MJ, Berh D, Braun A, Chen Y-chun, Eichler K, Eschbach C, Fritsch PMJ, Gerber B, Hoyer N, Jiang X et al..  2017.  The Ol1mpiad: concordance of behavioural faculties of stage 1 and stage 3 Drosophila larvae.. The Journal of Experimental Biology. 220(Pt 13):2452-2475.
Michels B, Saumweber T, Biernacki R, Thur J, Glasgow RDV, Schleyer M, Chen Y-chun, Eschbach C, Stocker RF, Toshima N et al..  2017.  Pavlovian conditioning of larval Drosophila: an illustrated, multilingual, hands-on manual for odor-taste associative learning in maggots.. Frontiers in Behavioral Neuroscience. 11:45.
Hart C, Abuladel N, Bee M, Kreider MC, CVitan AC, Esson MM, Farag A, Ibeh T, Kalivas EN, Larco D-M et al..  2017.  Protein-templated gold nanoparticle synthesis: protein organization, controlled gold sequestration, and unexpected reaction products.. Dalton Transactions (Cambridge, England : 2003). 46(47):16465-16473.
Jun JJaeyoon, Mitelut C, Lai C, Gratiy S, Anastassiou C, Harris TD.  2017.  Real-time spike sorting platform for high-density extracellular probes with ground-truth validation and drift correction.. bioRxiv.
Hattori D, Aso Y, Swartz KJ, Rubin GM, Abbott LF, Axel R.  2017.  Representations of Novelty and Familiarity in a Mushroom Body Compartment.. Cell. 169(5):956-69.
Hattori D, Aso Y, Swartz KJ, Rubin GM, Abbott LF, Axel R.  2017.  Representations of Novelty and Familiarity in a Mushroom Body Compartment.. Cell. 169(5):956-69.
Hattori D, Aso Y, Swartz KJ, Rubin GM, Abbott LF, Axel R.  2017.  Representations of Novelty and Familiarity in a Mushroom Body Compartment.. Cell. 169(5):956-69.
Priebe CE, Park Y, Tang M, Athreya A, Lyzinski V, Vogelstein JT, Qin Y, Cocanougher B, Eichler K, Zlatic M et al..  2017.  Semiparametric spectral modeling of the Drosophila connectome.. arXiv. :1705.03297.
Court RChristophe, Armstrong JDouglas, Borner J, Card GM, Costa M, Dickinson MH, Duch C, Korff W, Mann RS, Merritt D et al..  2017.  A systematic nomenclature for the Drosophila ventral nervous system.. bioRxiv.
Arganda-Carreras I, Kaynig V, Rueden C, Eliceiri KW, Schindelin J, Cardona A, H Seung S.  2017.  Trainable Weka Segmentation: a machine learning tool for microscopy pixel classification.. Bioinformatics (Oxford, England). 33(15):2424-6.
Jiang Z, Luo H-Y, Farrell JJ, Zhang Z, Schulz VP, Albarawi D, Steinberg MH, Al-Allawi NAS, Gallagher PG, Forget BG et al..  2017.  A variant Sp1 (R218Q) transcription factor might enhance HbF expression in β(0) -thalassaemia homozygotes.. British Journal of Haematology. 180(5):755-7.
Jiang Z, Luo H-Y, Farrell JJ, Zhang Z, Schulz VP, Albarawi D, Steinberg MH, Al-Allawi NAS, Gallagher PG, Forget BG et al..  2017.  A variant Sp1 (R218Q) transcription factor might enhance HbF expression in β(0) -thalassaemia homozygotes.. British Journal of Haematology. 180(5):755-7.
2016
Kang SWoo Sophie, Haydar G, Taniane C, Farrell G, Arias IM, Lippincott-Schwartz J, Fu D.  2016.  AMPK activation prevents and reverses drug-induced mitochondrial and hepatocyte injury by promoting mitochondrial fusion and function.. PLoS One. 11(10):e0165638.
Apostolides PF, Milstein AD, Grienberger C, Bittner KC, Magee JC.  2016.  Axonal filtering allows reliable output during dendritic plateau-driven complex spiking in CA1 neurons.. Neuron. 89(4):770-783.
Dunn TW, Mu Y, Narayan S, Randlett O, Naumann EA, Yang C-T, Schier AF, Freeman J, Engert F, Ahrens MB.  2016.  Brain-wide mapping of neural activity controlling zebrafish exploratory locomotion.. eLife.
Chu J, Oh Y, Sens A, Ataie N, Dana H, Macklin JJ, Laviv T, Welf ES, Dean KM, Zhang F et al..  2016.  A bright cyan-excitable orange fluorescent protein facilitates dual-emission microscopy and enhances bioluminescence imaging in vivo.. Nature Biotechnology. 34(7):760-7.
Quirin S, Vladimirov N, Yang C-T, Peterka DS, Yuste R, Ahrens MB.  2016.  Calcium imaging of neural circuits with extended depth-of-field light-sheet microscopy.. Optics Letters. 41(5):855-8.
Ren Q, Awasaki T, Huang Y-F, Liu Z, Lee T.  2016.  Cell class-lineage analysis reveals sexually dimorphic lineage compositions in the Drosophila brain.. Current Biology : CB. 26(19):2583-93.
Wan Y, Almeida AD, Rulands S, Chalour N, Muresan L, Wu Y, Simons BD, He J, Harris WA.  2016.  The ciliary marginal zone of the zebrafish retina: clonal and time-lapse analysis of a continuously growing tissue.. Development (Cambridge, England). 143(7):1099-107.
Royer LA, Richmond DL, Rother C, Andres B, Kainmueller D.  2016.  Convexity shape constraints for image segmentation.. IEEE Conference on Computer Vision and Pattern Recognition (CVPR).