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2012
Alves D, Arkani-Hamed N, Arora S, Bai Y, Baumgart M, Berger J, Buckley M, Butler B, Chang S, Cheng H-C et al..  2012.  Simplified models for LHC new physics searches. Journal of Physics G: Nuclear and Particle Physics. 39(10):105005.
Trcek T, Chao JA, Larson DR, Park HYoon, Zenklusen D, Shenoy SM, Singer RH.  2012.  Single-mRNA counting using fluorescent in situ hybridization in budding yeast.. Nature Protocols. 7(2):408-19.
Patel VL, Mitra S, Harris R, Buxbaum AR, Lionnet T, Brenowitz M, Girvin M, Levy M, Almo SC, Singer RH et al..  2012.  Spatial arrangement of an RNA zipcode identifies mRNAs under post-transcriptional control.. Genes & Development. 26(1):43-53.
Patel VL, Mitra S, Harris R, Buxbaum AR, Lionnet T, Brenowitz M, Girvin M, Levy M, Almo SC, Singer RH et al..  2012.  Spatial arrangement of an RNA zipcode identifies mRNAs under post-transcriptional control.. Genes & Development. 26(1):43-53.
Hedge MK, Gehring AM, Adkins CT, Weston LA, Lavis LD, R Johnson J.  2012.  The structural basis for the narrow substrate specificity of an acetyl esterase from Thermotoga maritima.. Biochimica et Biophysica Acta. 1824(9):1024-30.
Liu C, Placais P-Y, Yamagata N, Pfeiffer BD, Aso Y, Friedrich AB, Siwanowicz I, Rubin GM, Preat T, Tanimoto H.  2012.  A subset of dopamine neurons signals reward for odour memory in Drosophila.. Nature. 488(7412):512-6.
Jory A, Estella C, Giorgianni MW, Slattery M, Laverty TR, Rubin GM, Mann RS.  2012.  A survey of 6,300 genomic fragments for cis-regulatory activity in the imaginal discs of Drosophila melanogaster.. Cell Reports. 2(4):1014-24.
Cardona A, Saalfeld S, Schindelin J, Arganda-Carreras I, Preibisch S, Longair M, Tomancak P, Hartenstein V, Douglas RJ.  2012.  TrakEM2 software for neural circuit reconstruction.. PLoS One. 7:e38011.
Cardona A, Saalfeld S, Schindelin J, Arganda-Carreras I, Preibisch S, Longair M, Tomancak P, Hartenstein V, Douglas RJ.  2012.  TrakEM2 software for neural circuit reconstruction.. PLoS One. 7(6):e38011.
Lionnet T, Singer RH.  2012.  Transcription goes digital.. EMBO Reports. 13(4):313-21.
Revyakin A, Zhang Z, Coleman RA, Li Y, Inouye C, Lucas JK, Park S-R, Chu S, Tjian R.  2012.  Transcription initiation by human RNA polymerase II visualized at single-molecule resolution.. Genes & Development. 26:1691-702.
Revyakin A, Zhang Z, Coleman RA, Li Y, Inouye C, Lucas JK, Park S-R, Chu S, Tjian R.  2012.  Transcription initiation by human RNA polymerase II visualized at single-molecule resolution.. Genes & Development. 26:1691-702.
Lapidus KAB, Nwokafor C, Scott D, Baroni TE, Tenenbaum SA, Hiroi N, Singer RH, Czaplinski K.  2012.  Transgenic expression of ZBP1 in neurons suppresses cocaine-associated conditioning.. Learning & Memory. 19(2):35-42.
Brody T, Yavatkar AS, Kuzin A, Kundu M, Tyson LJ, Ross J, Lin T-Y, Lee C-H, Awasaki T, Lee T et al..  2012.  Use of a Drosophila genome-wide conserved sequence database to identify functionally related cis-regulatory enhancers.. Developmental Dynamics: An Official Publication of the American Association of Anatomists. 241:169-89.
Brody T, Yavatkar AS, Kuzin A, Kundu M, Tyson LJ, Ross J, Lin T-Y, Lee C-H, Awasaki T, Lee T et al..  2012.  Use of a Drosophila genome-wide conserved sequence database to identify functionally related cis-regulatory enhancers.. Developmental Dynamics: An Official Publication of the American Association of Anatomists. 241:169-89.
Brody T, Yavatkar AS, Kuzin A, Kundu M, Tyson LJ, Ross J, Lin T-Y, Lee C-H, Awasaki T, Lee T et al..  2012.  Use of a Drosophila genome-wide conserved sequence database to identify functionally related cis-regulatory enhancers.. Developmental Dynamics: An Official Publication of the American Association of Anatomists. 241:169-89.
Long F, Zhou J, Peng H.  2012.  Visualization and analysis of 3D microscopic images.. PLoS Computational Biology. 8:e1002519.
Ott C, Lippincott-Schwartz J.  2012.  Visualization of live primary cilia dynamics using fluorescence microscopy.. Current protocols in cell biology / editorial board, Juan S. Bonifacino ... [et al.]. Chapter 4:Unit4.26.
Ott C, Lippincott-Schwartz J.  2012.  Visualization of live primary cilia dynamics using fluorescence microscopy.. Current protocols in cell biology / editorial board, Juan S. Bonifacino ... [et al.]. Chapter 4:Unit4.26.
Sengupta P, van Engelenburg S, Lippincott-Schwartz J.  2012.  Visualizing cell structure and function with point-localization superresolution imaging.. Developmental cell. 23(6):1092-102.
2011
Wysocki LM, Lavis LD.  2011.  Advances in the chemistry of small molecule fluorescent probes.. Current Opinion in Chemical Biology. 15(6):752-9.
Lasek AW, Gesch J, Giorgetti F, Kharazia V, Heberlein U.  2011.  Alk is a transcriptional target of LMO4 and ERα that promotes cocaine sensitization and reward.. The Journal of Neuroscience: The Official Journal of the Society for Neuroscience. 31(40):14134-41.
Xie J, Zhao T, Lee T, Myers E, Peng H.  2011.  Anisotropic path searching for automatic neuron reconstruction.. Medical Image Analysis. 15:680-9.
Eddison M, Guarnieri DJ, Cheng L, Liu C-H, Moffat KG, Davis G, Heberlein U.  2011.  Arouser reveals a role for synapse number in the regulation of ethanol sensitivity.. Neuron. 70(5):979-90.
Zhao T, Xie J, Amat F, Clack N, Ahammad P, Peng H, Long F, Myers E.  2011.  Automated reconstruction of neuronal morphology based on local geometrical and global structural models.. Neuroinformatics. 9(2-3):247-61.