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Author Title Type [ Year(Asc)]
Filters: Author is Eddy, Sean R  [Clear All Filters]
2020
Rivas E, Clements J, Eddy SR.  2020.  Estimating the power of sequence covariation for detecting conserved RNA structure.. Bioinformatics. 36(10):3072-76.
Davis FP, Nern A, Picard S, Reiser MB, Rubin GM, Eddy SR, Henry GL.  2020.  A genetic, genomic, and computational resource for exploring neural circuit function.. eLife. 9
2016
Hubley R, Finn RD, Clements J, Eddy SR, Jones TA, Bao W, Smit AFA, Wheeler TJ.  2016.  The Dfam database of repetitive DNA families.. Nucleic Acids Research. 44(D1):D81-9.
Mo A, Luo C, Davis FP, Mukamel EA, Henry GL, Nery JR, Urich MA, Picard S, Lister R, Eddy SR et al..  2016.  Epigenomic landscapes of retinal rods and cones.. eLife. 5
2015
Chen X, Jung S, Beh LY, Eddy SR, Landweber LF.  2015.  Combinatorial DNA rearrangement facilitates the origin of new genes in ciliates.. Genome Biology and Evolution. 7(10):2859-70.
Mo A, Mukamel EA, Davis FP, Luo C, Henry GL, Picard S, Urich MA, Nery JR, Sejnowski TJ, Lister R et al..  2015.  Epigenomic signatures of neuronal diversity in the mammalian brain.. Neuron. 86(6):1369-1384.
Finn RD, Clements J, Arndt W, Miller BL, Wheeler TJ, Schreiber F, Bateman A, Eddy SR.  2015.  HMMER web server: 2015 update.. Nucleic Acids Research.
Eddy SR.  2015.  Homology searches for structural RNAs: from proof of principle to practical use.. RNA. 21(4):605-7.
Nawrocki EP, Burge SW, Bateman A, Daub J, Eberhardt RY, Eddy SR, Floden EW, Gardner PP, Jones TA, Tate J et al..  2015.  Rfam 12.0: updates to the RNA families database.. Nucleic Acids Research. 43(Database issue):D130-7.
2014
Eddy SR.  2014.  Computational analysis of conserved RNA secondary structure in transcriptomes and genomes.. Annual Review of Biophysics and Biomolecular Structure. 43:433-56.
2008
Finn RD, Tate J, Mistry J, Coggill PC, Sammut SJohn, Hotz H-R, Ceric G, Forslund K, Eddy SR, Sonnhammer ELL et al..  2008.  The Pfam protein families database.. Nucleic Acids Research. 36(Database Issue):D281-8.