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2021
Hammer M, Huisman M, Rigano A, Boehm U, Chambers JJ, Gaudreault N, North AJ, Pimentel JA, Sudar D, Bajcsy P et al..  2021.  Towards community-driven metadata standards for light microscopy: tiered specifications extending the OME model.. bioRxiv.
Hammer M, Huisman M, Rigano A, Boehm U, Chambers JJ, Gaudreault N, North AJ, Pimentel JA, Sudar D, Bajcsy P et al..  2021.  Towards community-driven metadata standards for light microscopy: tiered specifications extending the OME model.. bioRxiv.
Hammer M, Huisman M, Rigano A, Boehm U, Chambers JJ, Gaudreault N, North AJ, Pimentel JA, Sudar D, Bajcsy P et al..  2021.  Towards community-driven metadata standards for light microscopy: tiered specifications extending the OME model.. Nature Methods. 18(12):1427-1440.
Hammer M, Huisman M, Rigano A, Boehm U, Chambers JJ, Gaudreault N, North AJ, Pimentel JA, Sudar D, Bajcsy P et al..  2021.  Towards community-driven metadata standards for light microscopy: tiered specifications extending the OME model.. Nature Methods. 18(12):1427-1440.
Hückesfeld S, Schlegel P, Miroschnikow A, Schoofs A, Zinke I, Haubrich AN, Schneider-Mizell CM, Truman JW, Fetter RD, Cardona A et al..  2021.  Unveiling the sensory and interneuronal pathways of the neuroendocrine connectome in Drosophila.. eLife. 10
Hobson CM, Aaron JS, Heddleston JM, Chew T-L.  2021.  Visualizing the Invisible: Advanced Optical Microscopy as a Tool to Measure Biomechanical Forces.. Frontiers in Cell and Developmental Biology. 9:706126.
Cai C, Friedrich J, Singh A, M Eybposh H, Pnevmatikakis EA, Podgorski K, Giovannucci A.  2021.  VolPy: Automated and scalable analysis pipelines for voltage imaging datasets.. PLoS Computational Biology. 17(4):e1008806.
Lundberg E, Funke J, Uhlmann V, Gerlich D, Walter T, Carpenter A, Coehlo LPedro.  2021.  Which image-based phenotypes are most promising for using AI to understand cellular functions and why? Cell Systems. 12(5):384-387.
Lundberg E, Funke J, Uhlmann V, Gerlich D, Walter T, Carpenter A, Coehlo LPedro.  2021.  Which image-based phenotypes are most promising for using AI to understand cellular functions and why? Cell Systems. 12(5):384-387.
Heinrich L, Bennett D, Ackerman D, Park W, Bogovic J, Eckstein N, Petruncio A, Clements J, Pang S, C Xu S et al..  2021.  Whole-cell organelle segmentation in volume electron microscopy.. Nature. 599(7883):141-46.
Heinrich L, Bennett D, Ackerman D, Park W, Bogovic J, Eckstein N, Petruncio A, Clements J, Pang S, C Xu S et al..  2021.  Whole-cell organelle segmentation in volume electron microscopy.. Nature. 599(7883):141-46.
Collins JW, Martin D, Genomics, Core CBiology, Wang S, Yamada KM.  2021.  ZCCHC8 is required for the degradation of pervasive transcripts originating from multiple genomic regulatory features. bioRxiv.
Collins JW, Martin D, Genomics, Core CBiology, Wang S, Yamada KM.  2021.  ZCCHC8 is required for the degradation of pervasive transcripts originating from multiple genomic regulatory features. bioRxiv.
2020
Xie L, Dong P, Chen X, Hsieh T-HS, Banala S, De Marzio M, English BP, Qi Y, Jung SKyoung, Kieffer-Kwon K-R et al..  2020.  3D ATAC-PALM: super-resolution imaging of the accessible genome.. Nature Methods. 17(4):430-6.
Xie L, Dong P, Chen X, Hsieh T-HS, Banala S, De Marzio M, English BP, Qi Y, Jung SKyoung, Kieffer-Kwon K-R et al..  2020.  3D ATAC-PALM: super-resolution imaging of the accessible genome.. Nature Methods. 17(4):430-6.
Xie L, Dong P, Chen X, Hsieh T-HS, Banala S, De Marzio M, English BP, Qi Y, Jung SKyoung, Kieffer-Kwon K-R et al..  2020.  3D ATAC-PALM: super-resolution imaging of the accessible genome.. Nature Methods. 17(4):430-6.
Schröder S, Steinmetz NA, Krumin M, Pachitariu M, Rizzi M, Lagnado L, Harris KD, Carandini M.  2020.  Arousal modulates retinal output.. Neuron. 107(3):487.
Bai X, Melesse M, Turpin CGSorensen, Sloan D, Chen C-Y, Wang W-C, Lee P-Y, Simmons JR, Nebenfuehr B, Mitchell D et al..  2020.  Aurora B functions at the apical surface after specialized cytokinesis during morphogenesis in C. elegans.. Development. 147(1):1-16.
Bai X, Melesse M, Turpin CGSorensen, Sloan D, Chen C-Y, Wang W-C, Lee P-Y, Simmons JR, Nebenfuehr B, Mitchell D et al..  2020.  Aurora B functions at the apical surface after specialized cytokinesis during morphogenesis in C. elegans.. Development. 147(1):1-16.
Bai X, Melesse M, Turpin CGSorensen, Sloan D, Chen C-Y, Wang W-C, Lee P-Y, Simmons JR, Nebenfuehr B, Mitchell D et al..  2020.  Aurora B functions at the apical surface after specialized cytokinesis during morphogenesis in C. elegans.. Development. 147(1):1-16.
Park J, Coddington LT, Dudman JT.  2020.  Basal ganglia circuits for action specification.. Annual Review Neuroscience. 43:485-507.
Catalano JL, Mei N, Azanchi R, Song S, Blackwater T, Heberlein U, Kaun KR.  2020.  Behavioral features of motivated response to alcohol in Drosophila.. bioRxiv.
Zarowny L, Aggarwal A, Rutten VMS, Kolb I, Patel R, Huang H-Y, Chang Y-F, Phan T, Kanyo R, Ahrens MB et al..  2020.  Bright and high-performance genetically encoded Ca indicator based on mNeonGreen fluorescent protein.. ACS Sensors.
Zarowny L, Aggarwal A, Rutten VMS, Kolb I, Patel R, Huang H-Y, Chang Y-F, Phan T, Kanyo R, Ahrens MB et al..  2020.  Bright and high-performance genetically encoded Ca indicator based on mNeonGreen fluorescent protein.. ACS Sensors.
Deo C, Abdelfattah AS, Bhargava HK, Berro AJ, Falco N, Moeyaert B, Chupanova M, Lavis LD, Schreiter ER.  2020.  Bright and tunable far-red chemigenetic indicators.. bioRxiv.