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2011
Aponte Y, Atasoy D, Sternson SM.  2011.  AGRP neurons are sufficient to orchestrate feeding behavior rapidly and without training.. Nature Neuroscience. 14(3):351-5.
Lasek AW, Gesch J, Giorgetti F, Kharazia V, Heberlein U.  2011.  Alk is a transcriptional target of LMO4 and ERα that promotes cocaine sensitization and reward.. The Journal of Neuroscience: The Official Journal of the Society for Neuroscience. 31(40):14134-41.
Xie J, Zhao T, Lee T, Myers E, Peng H.  2011.  Anisotropic path searching for automatic neuron reconstruction.. Medical Image Analysis. 15:680-9.
Eddison M, Guarnieri DJ, Cheng L, Liu C-H, Moffat KG, Davis G, Heberlein U.  2011.  Arouser reveals a role for synapse number in the regulation of ethanol sensitivity.. Neuron. 70(5):979-90.
Eschbach C, Cano C, Haberkern H, Schraut K, Guan C, Triphan T, Gerber B.  2011.  Associative learning between odorants and mechanosensory punishment in larval Drosophila.. Journal of Expiremental Biology. 214(Pt 23):3897-905.
Settembre EC, Chen JZ, Dormitzer PR, Grigorieff N, Harrison SC.  2011.  Atomic model of an infectious rotavirus particle.. The EMBO Journal. 30(2):408-16.
Yu Y, Peng H.  2011.  Automated high speed stitching of large 3D microscopic images.. 2011 8TH IEEE International Symposium on Biomedical Imaging: From Nano to Macro. :238-41.
Zhao T, Xie J, Amat F, Clack N, Ahammad P, Peng H, Long F, Myers E.  2011.  Automated reconstruction of neuronal morphology based on local geometrical and global structural models.. Neuroinformatics. 9(2-3):247-61.
Long F, Peng H, Myers E.  2011.  Automatic 3D neuron tracing using all-paths pruning.. Conference on Intelligent Systems for Molecular Biology.
2012
Mizuseki K, Royer S, Diba K, Buzsáki G.  2012.  Activity dynamics and behavioral correlates of CA3 and CA1 hippocampal pyramidal neurons.. Hippocampus. 22(8):1659-80.
Petreanu L, Gutnisky DA, Huber D, Xu N-long, O’Connor DH, Tian L, Looger L, Svoboda K.  2012.  Activity in motor-sensory projections reveals distributed coding in somatosensation.. Nature. 489:299-303.
Devineni AV, Heberlein U.  2012.  Acute ethanol responses in Drosophila are sexually dimorphic.. Proceedings of the National Academy of Sciences of the United States of America. 109(51):21087-92.
Pietzsch T, Preibisch S, Tomancak P, Saalfeld S.  2012.  Advanced Programming with ImgLib2. Proceedings of the ImageJ User and Developer Conference.
Gold MG, Reichow SL, O’Neill SE, Weisbrod CR, Langeberg LK, Bruce JE, Gonen T, Scott JD.  2012.  AKAP2 anchors PKA with aquaporin-0 to support ocular lens transparency.. EMBO Molecular Medicine. 4(1):15-26.
Clack NG, O’Connor DH, Huber D, Petreanu L, Hires A, Peron S, Svoboda K, Myers EW.  2012.  Automated tracking of whiskers in videos of head fixed rodents.. PLoS Computational Biology. 8:e1002591.
Duy NThe, Lamecker H, Kainmueller D, Zachow S.  2012.  Automatic detection and classification of teeth in CT data.. Medical image computing and computer-assisted intervention : MICCAI ... International Conference on Medical Image Computing and Computer-Assisted Intervention. 15(Pt 1):609-16.
2013
Hu YS, Nan X, Sengupta P, Lippincott-Schwartz J, Cang H.  2013.  Accelerating 3B single-molecule super-resolution microscopy with cloud computing.. Nature methods. 10(2):96-7.
Everitt BJ, Heberlein U.  2013.  Addiction.. Current Opinion in Neurobiology. 23(4):463-6.
Molineros JE, Maiti AK, Sun C, Looger LL, Han S, Kim-Howard X, Glenn S, Adler A, Kelly JA, Niewold TB et al..  2013.  Admixture mapping in lupus identifies multiple functional variants within IFIH1 associated with apoptosis, inflammation, and autoantibody production.. PLoS Genetics. 9(2):e1003222.
Reichow SL, Clemens DM, J Freites A, Németh-Cahalan KL, Heyden M, Tobias DJ, Hall JE, Gonen T.  2013.  Allosteric mechanism of water-channel gating by Ca(2+)-calmodulin.. Nature Structural & Molecular Biology. 20(9):1085-92.
Shigenobu S, Stern DL.  2013.  Aphids evolved novel secreted proteins for symbiosis with bacterial endosymbiont.. Proc Biol Sci. 280(1750):20121952.
Xiao H, Peng H.  2013.  APP2: automatic tracing of 3D neuron morphology based on hierarchical pruning of a gray-weighted image distance-tree.. Bioinformatics (Oxford, England). 29:1448-54.
Gallagher T, Kim J, Oldenbroek M, Kerr R, You Y-J.  2013.  ASI regulates satiety quiescence in C. elegans.. The Journal of Neuroscience : The Official Journal of the Society for Neuroscience. 33(23):9716-24.
Scheffer L.K, Karsh B, Vitaladevun S..  2013.  Automated alignment of imperfect EM images for neural reconstruction.. arXiv. :arXiv:1304.6034[q-bio.QM].
Weissbrod A, Shapiro A, Vasserman G, Edry L, Dayan M, Yitzhaky A, Hertzberg L, Feinerman O, Kimchi T.  2013.  Automated long-term tracking and social behavioural phenotyping of animal colonies within a semi-natural environment.. Nature Communications. 4:2018.