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2025
Hillsley A, Stein J, Tillberg PW, Stern DL, Funke J.  2025.  A Bayesian Model to Count the Number of Two-State Emitters in a Diffraction Limited Spot.. Nano Lett.
Antunes MMota, Oliveira AGustavo, de Paula CMaria, Chew T-L, Paula-Neto HA, Menezes GB.  2025.  Bioimaging Brasil: democratizing in vivo optical microscopy to drive scientific progress across a vast nation.. Nat Methods.
Desissaire S, Ziemczonok M, Cantat-Moltrecht T, Kuś A, Godefroy G, Hervé L, Paviolo C, Krauze W, Allier C, Mandula O et al..  2025.  Bio-inspired 3D-printed phantom: Encoding cellular heterogeneity for characterization of quantitative phase imaging. Measurement. 247:116765.
Galbraith CG, English BP, Boehm U, Galbraith J.  2025.  BPS2025 - Local cytoplasmic tradewinds direct soluble proteins to their targets. Biophysical Journal. 124(3):375a-376a.
2024
Erard M, Favard C, Lavis LD, Recher G, Rigneault H, Sage D.  2024.  Back to the future - 20 years of progress and developments in photonic microscopy and biological imaging.. J Cell Sci. 137(20)
Lee Y-T, Senturk M, Guan Y, Wang MC.  2024.  Bacteria-organelle communication in physiology and disease. J Cell Biol. 223(7)
Hillsley A, Stein J, Tillberg PW, Stern DL, Funke J.  2024.  A Bayesian Solution to Count the Number of Molecules within a Diffraction Limited Spot. bioRxiv.
Lee RM, Eisenman LR, Khuon S, Aaron JS, Chew T-L.  2024.  Believing is seeing - the deceptive influence of bias in quantitative microscopy.. Journal of Cell Science. 137(1)
Aggarwal A, Sunil S, Bendifallah I, Moon M, Drobizhev M, Zarowny L, Zheng J, Wu S-Y, Lohman AW, Tebo AG et al..  2024.  Blue-shifted genetically encoded Ca2+ indicator with enhanced two-photon absorption. Neurophotonics.
Chen S, Liu Y, Wang ZAiden, Colonell J, Liu LD, Hou H, Tien N-W, Wang T, Harris T, Druckmann S et al..  2024.  Brain-wide neural activity underlying memory-guided movement.. Cell. 187(3):676-691.e16.
Schnoes AM, Green NH, Nguyen TA, Vale RD, Goodwin SS, Behrman SL.  2024.  Bridging gaps in traditional research training with iBiology Courses.. PLoS Biology. 22(1):e3002458.
Hoeller J, Zhong L, Pachitariu M, Romani S.  2024.  Bridging tuning and invariance with equivariant neuronal representations. bioRxiv.
De Niz M, García REscobedo, Ramirez CTerán, Pakowski Y, Abonza Y, Bialy N, Orr VL, Olivera A, Abonza V, Alleva K et al..  2024.  Building momentum through networks: Bioimaging across the Americas. Journal of Microscopy. n/a
2023
Liessem S, Held M, Bisen RS, Haberkern H, Lacin H, Bockemühl T, Ache JM.  2023.  Behavioral state-dependent modulation of insulin-producing cells in Drosophila.. Current Biology. 33(3):449.
Thuma TBT, Bogovic JA, Gunton KB, Jimenez H, Negreiros B, Pulido JS.  2023.  The big warp: Registration of disparate retinal imaging modalities and an example overlay of ultrawide-field photos and en-face OCTA images.. PLoS One. 18(4):e0284905.
Manubens-Gil L, Zhou Z, Chen H, Ramanathan A, Liu X, Liu Y, Bria A, Gillette T, Ruan Z, Yang J et al..  2023.  BigNeuron: a resource to benchmark and predict performance of algorithms for automated tracing of neurons in light microscopy datasets.. Nature Methods. 20(6)
Mamiya A, Sustar A, Siwanowicz I, Qi Y, Lu T-C, Gurung P, Chen C, Phelps JS, Kuan AT, Pacureanu A et al..  2023.  Biomechanical origins of proprioceptor feature selectivity and topographic maps in the Drosophila leg.. Neuron.
Yoo J, Dombrovski M, Mirshahidi P, Nern A, LoCascio SA, S Zipursky L, Kurmangaliyev YZ.  2023.  Brain wiring determinants uncovered by integrating connectomes and transcriptomes.. Current Biology. 33(18):3998-3998.
Chen S, Liu Y, Wang Z, Colonell J, Liu LD, Hou H, Tien N-W, Wang T, Harris T, Druckmann S et al..  2023.  Brain-wide neural activity underlying memory-guided movement. bioRxiv.
2022
Nielsen AF, Bindereif A, Bozzoni I, Hanan M, Hansen TB, Irimia M, Kadener S, Kristensen LS, Legnini I, Morlando M et al..  2022.  Best practice standards for circular RNA research. Nature Methods. 19(10):1208-1220.
Santos ÁDos, Fili N, Hari-Gupta Y, Gough RE, Wang L, Martin-Fernandez M, Arron J, Wait E, Chew TLeong, Toseland C.  2022.  Binding partners regulate unfolding of myosin VI to activate the molecular motor.. The Biochemical Journal. 479(13):1409-1428.
Mamiya A, Gurung P, Siwanowicz I, Sustar A, Chen C, Phelps JS, Kuan AT, Pacureanu A, Lee W-CAllen, Mhatre N et al..  2022.  Biomechanical origins of proprioceptive maps in the Drosophila leg. bioRxiv.
Li Q, Gao Y, Li H, Liu H, Wang D, Pan W, Liu S, Xu Y.  2022.  Brain structure and synaptic protein expression alterations after antidepressant treatment in a Wistar-Kyoto rat model of depression.. Journal of Affective Disorders. 314:293-302.
Yang E, Zwart MF, Rubinov M, James B, Wei Z, Narayan S, Vladimirov N, Mensh BD, Fitzgerald JE, Ahrens MB.  2022.  A brainstem integrator for self-localization and positional homeostasis. Cell. 185(26):5011-5027.e20.
Mohar B, Grimm JB, Patel R, Brown TA, Tillberg P, Lavis LD, Spruston N, Svoboda K.  2022.  Brain-wide measurement of protein turnover with high spatial and temporal resolution. bioRxiv.