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2024
Yaguchi K, Saito D, Menon T, Matsura A, Mizutani T, Kotani T, Nair S, Uehara R.  2024.  Haploidy-linked cell proliferation defects limit larval growth in Zebrafish. bioRxiv.
Hario S, Le GNT, Sugimoto H, Takahashi-Yamashiro K, Nishinami S, Toda H, Li S, Marvin JS, Kuroda S, Drobizhev M et al..  2024.  High-Performance Genetically Encoded Green Fluorescent Biosensors for Intracellular l-Lactate.. ACS Central Science. 10(2):402-416.
Guerrero DKRangel, Balueva K, Barayeu U, Baracskay P, Gridchyn I, Nardin M, Roth CNina, Wulff P, Csicsvari J.  2024.  Hippocampal cholecystokinin-expressing interneurons regulate temporal coding and contextual learning. Neuron.
Carrillo RA, Wang Y, Salazar R, Simonetta L, Sorrentino V, Gatton TJ, Wu B, Vecsey CG.  2024.  hkb is required for DIP-α expression and target recognition in the Drosophila neuromuscular circuit. Communications Biology. 7(507)
Xu C, Ramos TB, Rogers EM, Reiser MB, Doe CQ.  2024.  Homeodomain proteins hierarchically specify neuronal diversity and synaptic connectivity. eLife.
Yi B, Tanaka YL, Kosako H, Butlertanaka EP, Sengupta P, Lippincott-Schwartz J, Saito A, Yoshimura SH.  2024.  Host ZCCHC3 blocks HIV-1 infection and production by a dual mechanism. iScience.
Boffi NM, Guo Y, Rycroft CH, Amir A.  2024.  How microscopic epistasis and clonal interference shape the fitness trajectory in a spin glass model of microbial long-term evolution. eLife.
Hou K, Ge P, Sawaya MR, Dolinsky JL, Yang Y, Jiang YXiao, Lutter L, Boyer DR, Cheng X, Pi J et al..  2024.  How short peptides can disassemble ultra-stable tau fibrils extracted from Alzheimer’s disease brain by a strain-relief mechanism. bioRxiv.
2023
Ahmed M, Rajagopalan AE, Pan Y, Li Y, Williams DL, Pedersen EA, Thakral M, Previero A, Close KC, Christoforou CP et al..  2023.  Hacking brain development to test models of sensory coding. bioRxiv.
Yamada D, Bushey D, Feng L, Hibbard K, Sammons M, Funke J, Litwin-Kumar A, Hige T, Aso Y.  2023.  Hierarchical architecture of dopaminergic circuits enables second-order conditioning in Drosophila. eLife.
Laine RF, Heil HS, Coelho S, Nixon-Abell J, Jimenez A, Wiesner T, Martínez D, Galgani T, Régnier L, Stubb A et al..  2023.  High-fidelity 3D live-cell nanoscopy through data-driven enhanced super-resolution radial fluctuation.. Nature Methods.
Zhang H, P Rich D, Lee AK, Sharpee TO.  2023.  Hippocampal spatial representations exhibit a hyperbolic geometry that expands with experience.. Nature Neuroscience. 26(1):131-139.
Wright KM, DiNapoli SR, Miller MS, P Azurmendi A, Zhao X, Yu Z, Chakrabarti M, Shi WX, Douglass J, Hwang MS et al..  2023.  Hydrophobic interactions dominate the recognition of a KRAS G12V neoantigen.. Nature Communications. 14(1):5063.
2022
Croteau-Chonka EC, Clayton MS, Venkatasubramanian L, Harris SN, Jones BMW, Narayan L, Winding M, Masson J-B, Zlatic M, Klein KT.  2022.  High-throughput automated methods for classical and operant conditioning of larvae.. eLife. 11
Jiang W-C, Xu S, Dudman JT.  2022.  Hippocampal representations of foraging trajectories depend upon spatial context.. Nature Neuroscience. 25(12):1693-1705.
Lai Y-W, Miyares RL, Liu L-Y, Chu S-Y, Lee T, Yu H-H.  2022.  Hormone-controlled changes in the differentiation state of post-mitotic neurons.. Current Biology. 32(10):2341-2348.
Viukov S, Shani T, Bayerl J, Aguilera-Castrejon A, Oldak B, Sheban D, Tarazi S, Stelzer Y, Hanna JH, Novershtern N.  2022.  Human primed and naïve PSCs are both able to differentiate into trophoblast stem cells.. Stem Cell Reports. 17(11):2484-2500.
2021
Deo C, Abdelfattah AS, Bhargava HK, Berro AJ, Falco N, Farrants H, Moeyaert B, Chupanova M, Lavis LD, Schreiter ER.  2021.  The HaloTag as a general scaffold for far-red tunable chemigenetic indicators.. Nature Chemical Biology.
Xie ME, Adam Y, Fan LZ, Böhm UL, Kinsella I, Zhou D, Rozsa M, Singh A, Svoboda K, Paninski L et al..  2021.  High-fidelity estimates of spikes and subthreshold waveforms from 1-photon voltage imaging in vivo.. Cell Reports. 35(1):108954.
Stringer C, Michaelos M, Tsyboulski D, Lindo SE, Pachitariu M.  2021.  High-precision coding in visual cortex.. Cell. 184(10):2767-78.
Kim AK, Looger LL, Porter LL.  2021.  A high-throughput predictive method for sequence-similar fold switchers.. Biopolymers. 112(10):e23416.
Graham K, Spruston N, Bloss E.  2021.  Hippocampal and thalamic afferents form distinct synaptic microcircuits in the mouse frontal cortex.. Cell Reports. 37(3):109837.
Eiselt A-K, Chen S, Chen J, Arnold J, Kim T, Pachitariu M, Sternson SM.  2021.  Hunger or thirst state uncertainty is resolved by outcome evaluation in medial prefrontal cortex to guide decision-making.. Nature Neuroscience. 24(7):907-912.
2020
Molina RS, King J, Franklin J, Clack N, McRaven C, Goncharov V, Flickinger D, Svoboda K, Drobizhev M, Hughes TE.  2020.  High throughput instrument to screen fluorescent proteins under two-photon excitation.. Biomedical Optics Express. 11(12):7192-7203.
McRaven C, Tanese D, Zhang L, Yang C-T, Ahrens MB, Emiliani V, Koyama M.  2020.  High-throughput cellular-resolution synaptic connectivity mapping in vivo with concurrent two-photon optogenetics and volumetric Ca2+ imaging. bioRxiv.