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2025
Hou X, Li Y, Hobson CM, Shroff H, Guo M, Liu H.  2025.  HD2Net: A Deep Learning Framework for Simultaneous Denoising and Deaberration in Fluorescence Microscopy. bioRxiv.
Hou X, Li Y, Hobson CM, Shroff H, Guo M, Liu H.  2025.  HD2Net: A Deep Learning Framework for Simultaneous Denoising and Deaberration in Fluorescence Microscopy. bioRxiv.
Zhu Z, Gong R, Rodriguez V, Quach KT, Chen X, Sternson SM.  2025.  Hedonic eating is controlled by dopamine neurons that oppose GLP-1R satiety.. Science. 387(6741):eadt0773.
Kim J, Liu ZJ.  2025.  High-resolution imaging of RNA and proteins in thick tissues using cycleHCR.. Nat Rev Genet.
Almeida JA, Avila DB, Longmore GD, Pathak A.  2025.  History of hypoxia exposure aids future cell invasion according to cell type and collagen density.. Mol Biol Cell. :mbcE24120580.
Rokicki K, Schauder D, Olbris DJ, Goina C, Clements J, Edson P, Kawase T, Svirskas R, Arshadi C, Feng D et al..  2025.  HortaCloud: An Open and Collaborative Platform for Whole Brain Neuronal Reconstructions. bioRxiv.
2024
Yaguchi K, Saito D, Menon T, Matsura A, Mizutani T, Kotani T, Nair S, Uehara R.  2024.  Haploidy-linked cell proliferation defects limit larval growth in Zebrafish. Open Biol.. 14(10):240126.
Hario S, Le GNT, Sugimoto H, Takahashi-Yamashiro K, Nishinami S, Toda H, Li S, Marvin JS, Kuroda S, Drobizhev M et al..  2024.  High-Performance Genetically Encoded Green Fluorescent Biosensors for Intracellular l-Lactate.. ACS Central Science. 10(2):402-416.
Bhattacharya S, Ettela A, Haydak J, Hobson CM, Stern A, Yoo M, Chew T-L, G Gusella L, Gallagher EJ, Hone JC et al..  2024.  A high-throughput microfabricated platform for rapid quantification of metastatic potential.. Sci Adv. 10(33):eadk0015.
Guerrero DKRangel, Balueva K, Barayeu U, Baracskay P, Gridchyn I, Nardin M, Roth CNina, Wulff P, Csicsvari J.  2024.  Hippocampal cholecystokinin-expressing interneurons regulate temporal coding and contextual learning. Neuron.
Carrillo RA, Wang Y, Salazar R, Simonetta L, Sorrentino V, Gatton TJ, Wu B, Vecsey CG.  2024.  hkb is required for DIP-α expression and target recognition in the Drosophila neuromuscular circuit. Communications Biology. 7(507)
Xu C, Ramos TB, Rogers EM, Reiser MB, Doe CQ.  2024.  Homeodomain proteins hierarchically specify neuronal diversity and synaptic connectivity. eLife.
Yi B, Tanaka YL, Kosako H, Butlertanaka EP, Sengupta P, Lippincott-Schwartz J, Saito A, Yoshimura SH.  2024.  Host ZCCHC3 blocks HIV-1 infection and production by a dual mechanism. iScience.
Zouinkhi M, Rhoades JL, Weigel AV.  2024.  Hot-Distance: Combining One-Hot and Signed Distance Embeddings for Segmentation. arXiv. :2406.17936.
Boffi NM, Guo Y, Rycroft CH, Amir A.  2024.  How microscopic epistasis and clonal interference shape the fitness trajectory in a spin glass model of microbial long-term evolution. eLife.
Hou K, Ge P, Sawaya MR, Dolinsky JL, Yang Y, Jiang YXiao, Lutter L, Boyer D, Cheng X, Pi J et al..  2024.  How short peptides can disassemble ultra‐stable tau fibrils extracted from Alzheimer’s disease brain by a strain‐relief mechanismAbstractBackgroundMethodResultConclusion. Alzheimer's & Dementia. 20(S6)
Christenson MP, Diez ASanz, Heath SL, Saavedra-Weisenhaus M, Adachi A, Nern A, Abbott LF, Behnia R.  2024.  Hue selectivity from recurrent circuitry in Drosophila. Nat Neurosci.
2023
Ahmed M, Rajagopalan AE, Pan Y, Li Y, Williams DL, Pedersen EA, Thakral M, Previero A, Close KC, Christoforou CP et al..  2023.  Hacking brain development to test models of sensory coding. bioRxiv.
Yamada D, Bushey D, Feng L, Hibbard K, Sammons M, Funke J, Litwin-Kumar A, Hige T, Aso Y.  2023.  Hierarchical architecture of dopaminergic circuits enables second-order conditioning in Drosophila. eLife.
Laine RF, Heil HS, Coelho S, Nixon-Abell J, Jimenez A, Wiesner T, Martínez D, Galgani T, Régnier L, Stubb A et al..  2023.  High-fidelity 3D live-cell nanoscopy through data-driven enhanced super-resolution radial fluctuation.. Nature Methods.
Zhang H, P Rich D, Lee AK, Sharpee TO.  2023.  Hippocampal spatial representations exhibit a hyperbolic geometry that expands with experience.. Nature Neuroscience. 26(1):131-139.
Wright KM, DiNapoli SR, Miller MS, P Azurmendi A, Zhao X, Yu Z, Chakrabarti M, Shi WX, Douglass J, Hwang MS et al..  2023.  Hydrophobic interactions dominate the recognition of a KRAS G12V neoantigen.. Nature Communications. 14(1):5063.
2022
Croteau-Chonka EC, Clayton MS, Venkatasubramanian L, Harris SN, Jones BMW, Narayan L, Winding M, Masson J-B, Zlatic M, Klein KT.  2022.  High-throughput automated methods for classical and operant conditioning of larvae.. eLife. 11
Jiang W-C, Xu S, Dudman JT.  2022.  Hippocampal representations of foraging trajectories depend upon spatial context.. Nature Neuroscience. 25(12):1693-1705.
Lai Y-W, Miyares RL, Liu L-Y, Chu S-Y, Lee T, Yu H-H.  2022.  Hormone-controlled changes in the differentiation state of post-mitotic neurons.. Current Biology. 32(10):2341-2348.