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2014
Port F, Chen H-M, Lee T, Bullock SL.  2014.  Optimized CRISPR/Cas tools for efficient germline and somatic genome engineering in Drosophila.. Proceedings of the National Academy of Sciences of the United States of America. 111(29):E2967-76.
Thestrup T, Litzlbauer J, Bartholomäus I, Mues M, Russo L, Dana H, Kovalchuk Y, Liang Y, Kalamakis G, Laukat Y et al..  2014.  Optimized ratiometric calcium sensors for functional in vivo imaging of neurons and T lymphocytes.. Nature Methods. 11(2):175-82.
Donnelly NA, Holtzman T, P Rich D, Nevado-Holgado AJ, Fernando ABP, Van Dijck G, Holzhammer T, Paul O, Ruther P, Paulsen O et al..  2014.  Oscillatory activity in the medial prefrontal cortex and nucleus accumbens correlates with impulsivity and reward outcome.. PLoS One. 9(10):e111300.
2013
Kainmueller D, Lamecker H, Heller MO, Weber B, Hege H-C, Zachow S.  2013.  Omnidirectional displacements for deformable surfaces.. Medical image analysis. 17(4):429-41.
Burns R, Roncal WGray, Kleissas D, Lillaney K, Manavalan P, Perlman E, Berger DR, Bock DD, Chung K, Grosenick L et al..  2013.  The Open Connectome Project Data Cluster: Scalable analysis and vision for high-throughput neuroscience.. Scientific and Statistical Database Management: International Conference, SSDBM ... : Proceedings. International Conference on Scientific and Statistical Database Management.
Marvin JS, Borghuis BG, Tian L, Cichon J, Harnett MT, Akerboom J, Gordus A, Renninger SL, Chen T-W, Bargmann CI et al..  2013.  An optimized fluorescent probe for visualizing glutamate neurotransmission.. Nature Methods. 10:162-70.
Priebe C.E, Vogelstein J., Bock D..  2013.  Optimizing the quantity/quality trade-off in connectome inference.. Communications in Statistics-Theory and Methods. 42:3455-62.
Portugues R, Severi KE, Wyart C, Ahrens MB.  2013.  Optogenetics in a transparent animal: circuit function in the larval zebrafish.. Current Opinion in Neurobiology. 23(1):119-26.
Ruiz O, Lustig BR, Nassi JJ, Cetin A, Reynolds JH, Albright TD, Callaway EM, Stoner GR, Roe AW.  2013.  Optogenetics through windows on the brain in the nonhuman primate.. Journal of neurophysiology. 110(6):1455-67.
Hooks BM, Mao T, Gutnisky DA, Yamawaki N, Svoboda K, Shepherd GMG.  2013.  Organization of cortical and thalamic input to pyramidal neurons in mouse motor cortex.. The Journal of Neuroscience. 33(2):748-60.
Nannenga BL, Iadanza MG, Vollmar BS, Gonen T.  2013.  Overview of electron crystallography of membrane proteins: crystallization and screening strategies using negative stain electron microscopy.. Current Protocols in Protein Science . Chapter 17:Unit17.15.
Swart EC, Bracht JR, Magrini V, Minx P, Chen X, Zhou Y, Khurana JS, Goldman AD, Nowacki M, Schotanus K et al..  2013.  The Oxytricha trifallax macronuclear genome: a complex eukaryotic genome with 16,000 tiny chromosomes.. PLoS Biology. 11(1):e1001473.
2012
Pacifico R, Dewan A, Cawley D, Guo C, Bozza T.  2012.  An olfactory subsystem that mediates high-sensitivity detection of volatile amines.. Cell Rep. 2(1):76-88.
Sindelar CV, Grigorieff N.  2012.  Optimal noise reduction in 3D reconstructions of single particles using a volume-normalized filter.. Journal of Structural Biology. 180:26-38.
Akerboom J, Chen T-W, Wardill TJ, Marvin JS, Mutlu S, Caldero NCarreras, Esposti F, Borghuis BG, Sun XRichard, Gordus A et al..  2012.  Optimization of a GCaMP calcium indicator for neural activity imaging.. The Journal of Neuroscience. 32:13819-40.
Husson SJ, Costa WSteuer, Wabnig S, Stirman JN, Watson JD, W Spencer C, Akerboom J, Looger LL, Treinin M, Miller DM et al..  2012.  Optogenetic analysis of a nociceptor neuron and network reveals ion channels acting downstream of primary sensors.. Current Biology. 22(9):743-52.
Edwards TN, Nuschke AC, Nern A, Meinertzhagen IA.  2012.  Organization and metamorphosis of glia in the Drosophila visual system.. The Journal of Comparative Neurology. 520(10):2067-85.
Henderson R, Sali A, Baker ML, Carragher B, Devkota B, Downing KH, Egelman EH, Feng Z, Frank J, Grigorieff N et al..  2012.  Outcome of the first electron microscopy validation task force meeting.. Structure. 20(2):205-14.
2011
Magee JC.  2011.  Observations on clustered synaptic plasticity and highly structured input patterns.. Neuron. 72(6):887-8.
Ahrens MB, Sahani M.  2011.  Observers exploit stochastic models of sensory change to help judge the passage of time.. Current Biology. 21(3):200-6.
Cao ZFang Huang, Burdakov D, Sarnyai Z.  2011.  Optogenetics: potentials for addiction research.. Addiction Biology. 16(4):519-31.
Lee T, Awasaki T.  2011.  Orphan nuclear receptors control neuronal remodeling during fly metamorphosis.. Nature Neuroscience. 14:6-7.
2010
Freundt EC, Yu L, Goldsmith CS, Welsh S, Cheng A, Yount B, Liu W, Frieman MB, Buchholz UJ, Screaton GR et al..  2010.  The open reading frame 3a protein of severe acute respiratory syndrome-associated coronavirus promotes membrane rearrangement and cell death.. Journal of virology. 84(2):1097-109.
Druckmann S, Chklovskii D.  2010.  Over-complete representations on recurrent neural networks can support persistent percepts.. Neural Information Processing Systems 23 (NIPS 2010). 23:541-9.
Davis FP, Sali A.  2010.  The overlap of small molecule and protein binding sites within families of protein structures.. PLoS Computational Biology. 6(2):e1000668.