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2022
Mahalingam G, Torres R, Kapner D, Trautman ET, Fliss T, Seshamani S, Perlman E, Young R, Kinn S, Buchanan JA et al..  2022.  A scalable and modular automated pipeline for stitching of large electron microscopy datasets.. eLife. 11
Wu S-Y, Wen Y, Serre NBC, Laursen CCharlotte, Dietz AGrostøl, Taylor BR, Drobizhev M, Molina RS, Aggarwal A, Rancic V et al..  2022.  A sensitive and specific genetically encoded potassium ion biosensor for in vivo applications across the tree of life.. PLoS Biology. 20(9):e3001772.
Sheu S-H, Upadhyayula S, Dupuy V, Pang S, Lemire AL, Walpita D, H. Pasolli A, Deng F, Wan J, Wang L et al..  2022.  A serotonergic axon-cilium synapse drives nuclear signaling to maintain chromatin accessibility. Cell. 185(18):3390-3407.
Almahayni K, Spiekermann M, Fiore A, Yu G, Pedram K, Möckl L.  2022.  Small molecule inhibitors of mammalian glycosylation.. Matrix Biology Plus. 16:100108.
Hirano S, Kappel K, Altae-Tran H, Faure G, Wilkinson ME, Kannan S, F Demircioglu E, Yan R, Shiozaki M, Yu Z et al..  2022.  Structure of the OMEGA nickase IsrB in complex with ωRNA and target DNA.. Nature. 610(7932):575-581.
Zheng Z, Li F, Fisher C, Ali IJ, Sharifi N, Calle-Schuler S, Hsu J, Masoodpanah N, Kmecova L, Kazimiers T et al..  2022.  Structured sampling of olfactory input by the fly mushroom body.. Current Biology. 32(15):3334-3349.e6.
Frazzette N, Cruz AC, Wu X, Hammer JA, Lippincott-Schwartz J, Siegel RM, Sengupta P.  2022.  Super-Resolution Imaging of Fas/CD95 Reorganization Induced by Membrane-Bound Fas Ligand Reveals Nanoscale Clustering Upstream of FADD Recruitment.. Cells. 11(12)
Moore RP, Fogerson SM, U Tulu S, Yu JW, Cox AH, Sican MA, Li D, Legant WR, Weigel AV, Crawford JM et al..  2022.  Super-resolution microscopy reveals actomyosin dynamics in medioapical arrays.. Molecular Biology of the Cell. :mbcE21110537.
Moore RP, Fogerson SM, U Tulu S, Yu JW, Cox AH, Sican MA, Li D, Legant WR, Weigel AV, Crawford JM et al..  2022.  Superresolution microscopy reveals actomyosin dynamics in medioapical arrays.. Molecular Biology of the Cell. 33(11):ar94.
Fabian J, Siwanowicz I, Uhrhan M, Maeda M, Bomphrey RJ, Lin H-T.  2022.  Systematic characterization of wing mechanosensors that monitor airflow and wing deformations.. iScience. 25(4):104150.
Espinosa-Medina I, Feliciano D, Belmonte-Mateos C, Miyares RLinda, Garcia-Marques J, Foster B, Lindo S, Pujades C, Koyama M, Lee T.  2022.  TEMPO enables sequential genetic labeling and manipulation of vertebrate cell lineages.. Neuron.
Espinosa-Medina I, Feliciano D, Belmonte-Mateos C, Miyares RLinda, Garcia-Marques J, Foster B, Lindo S, Pujades C, Koyama M, Lee T.  2022.  TEMPO enables sequential genetic labeling and manipulation of vertebrate cell lineages.. Neuron.
[Anonymous].  2022.  Tracking by Weakly-Supervised Learning and Graph Optimization for Whole-Embryo C. elegans lineages. International Conference on Medical Image Computing and Computer-Assisted Intervention.
Zhu P-P, Hung H-F, Batchenkova N, Nixon-Abell J, Henderson J, Zheng P, Renvoisé B, Pang S, C Xu S, Saalfeld S et al..  2022.  Transverse endoplasmic reticulum expansion in hereditary spastic paraplegia corticospinal axons.. Human Molecular Genetics.
Zhu P-P, Hung H-F, Batchenkova N, Nixon-Abell J, Henderson J, Zheng P, Renvoisé B, Pang S, C Xu S, Saalfeld S et al..  2022.  Transverse endoplasmic reticulum expansion in hereditary spastic paraplegia corticospinal axons.. Human Molecular Genetics. 31(16):2779-2795.
Satou C, Neve RL, Oyibo HK, Zmarz P, Huang K-H, Bouldoires EArn, Mori T, Higashijima S-I, Keller GB, Friedrich RW.  2022.  A viral toolbox for conditional and transneuronal gene expression in zebrafish. eLife. 11:e77153.
2021
Imbert PRC, Saric A, Pedram K, Bertozzi CR, Grinstein S, Freeman SA.  2021.  An Acquired and Endogenous Glycocalyx Forms a Bidirectional “Don’t Eat” and “Don’t Eat Me” Barrier to Phagocytosis. Current Biology. 31(1):77-89.e5.
Pan W-X, Fan AYin, Chen S, Alemi SFaggert.  2021.  Acupuncture modulates immunity in sepsis: Toward a science-based protocol.. Autonomic Neuroscience. 232:102793.
Tharp KM, Higuchi-Sanabria R, Timblin GA, Ford B, Garzon-Coral C, Schneider C, Muncie JM, Stashko C, Daniele JR, Moore AS et al..  2021.  Adhesion-mediated mechanosignaling forces mitohormesis.. Cell Metabolism. 33(7):1322.
Tharp KM, Higuchi-Sanabria R, Timblin GA, Ford B, Garzon-Coral C, Schneider C, Muncie JM, Stashko C, Daniele JR, Moore AS et al..  2021.  Adhesion-mediated mechanosignaling forces mitohormesis.. Cell Metabolism. 33(7):1322.
Koenecke A, Powell M, Xiong R, Shen Z, Fischer N, Huq S, Khalafallah AM, Trevisan M, Sparen P, Carrero JJ et al..  2021.  Alpha-1 adrenergic receptor antagonists to prevent hyperinflammation and death from lower respiratory tract infection.. eLife. 10
Finkelstein A, Fontolan L, Economo MN, Li N, Romani S, Svoboda K.  2021.  Attractor dynamics gate cortical information flow during decision-making.. Nature Neuroscience. 24(6):843-50.
Finkelstein A, Fontolan L, Economo MN, Li N, Romani S, Svoboda K.  2021.  Attractor dynamics gate cortical information flow during decision-making.. Nature Neuroscience. 24(6):843-50.
Buhmann J, Sheridan A, Gerhard S, Krause R, Nguyen T, Heinrich L, Schlegel P, Lee W-CAllen, Wilson R, Saalfeld S et al..  2021.  Automatic Detection of Synaptic Partners in a Whole-Brain Drosophila EM Dataset. Nature Methods. 18(7):771-4.
Ji X, Ferreira T, Friedman B, Liu R, Liechty H, Bas E, Chandrashekar J, Kleinfeld D.  2021.  Brain microvasculature has a common topology with local differences in geometry that match metabolic load.. Neuron. 109(7):1168.