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2024
Zhu RE, Diao X, Liu X, Ru Q, Wu Z, Zhang Z, Looger LL, Zhu J.  2024.  GESIAP3.0: Sensor-based Image Analysis Program for Transmission Visualization In Vivo. bioRxiv.
Guerrero DKRangel, Balueva K, Barayeu U, Baracskay P, Gridchyn I, Nardin M, Roth CNina, Wulff P, Csicsvari J.  2024.  Hippocampal cholecystokinin-expressing interneurons regulate temporal coding and contextual learning. Neuron.
Xu C, Ramos TB, Rogers EM, Reiser MB, Doe CQ.  2024.  Homeodomain proteins hierarchically specify neuronal diversity and synaptic connectivity. eLife.
Xu C, Ramos TB, Rogers EM, Reiser MB, Doe CQ.  2024.  Homeodomain proteins hierarchically specify neuronal diversity and synaptic connectivity. eLife.
Xu C, Ramos TB, Rogers EM, Reiser MB, Doe CQ.  2024.  Homeodomain proteins hierarchically specify neuronal diversity and synaptic connectivity. eLife.
Zouinkhi M, Rhoades JL, Weigel AV.  2024.  Hot-Distance: Combining One-Hot and Signed Distance Embeddings for Segmentation. arXiv. :2406.17936.
Boffi NM, Guo Y, Rycroft CH, Amir A.  2024.  How microscopic epistasis and clonal interference shape the fitness trajectory in a spin glass model of microbial long-term evolution. eLife.
Marvin JS, Kokotos AC, Kumar M, Pulido C, Tkachuk AN, Yao JShuxin, Brown TA, Ryan TA.  2024.  iATPSnFR2: a high dynamic range fluorescent sensor for monitoring intracellular ATP. Proc Natl Acad Sci U S A.
Yamaguchi N, Otsuna H, Eisenberg-Bord M, Ramakrishnan L.  2024.  An Image Processing Tool for Automated Quantification of Bacterial Burdens in Zebrafish Larvae. bioRxiv.
Yamaguchi N, Otsuna H, Eisenberg-Bord M, Ramakrishnan L.  2024.  An Image Processing Tool for Automated Quantification of Bacterial Burdens in Zebrafish Larvae.. Zebrafish.
Ruan X, Mueller M, Liu G, Görlitz F, Fu T-M, Milkie DE, Lillvis J, Killilea A, Betzig E, Upadhyayula S.  2024.  Image processing tools for petabyte-scale light sheet microscopy data.. Nat. Methods.
Fiore A, Yu G, Northey JJ, Patel R, Ravenscroft TA, Ikegami R, Kolkman W, Kumar P, Grimm JB, Dilan TL et al..  2024.  Imaging the extracellular matrix in live tissues and organisms with a glycan-binding fluorophore. bioRxiv.
Fiore A, Yu G, Northey JJ, Patel R, Ravenscroft TA, Ikegami R, Kolkman W, Kumar P, Grimm JB, Dilan TL et al..  2024.  Imaging the extracellular matrix in live tissues and organisms with a glycan-binding fluorophore. bioRxiv.
Hoang N, Sardaripour N, Ramey GD, Schilling K, Liao E, Chen Y, Park JHyun, Bledsoe X, Landman BA, Gamazon ER et al..  2024.  Integration of estimated regional gene expression with neuroimaging and clinical phenotypes at biobank scale.. PLoS Biol. 22(9):e3002782.
Hoang N, Sardaripour N, Ramey GD, Schilling K, Liao E, Chen Y, Park JHyun, Bledsoe X, Landman BA, Gamazon ER et al..  2024.  Integration of estimated regional gene expression with neuroimaging and clinical phenotypes at biobank scale.. PLoS Biol. 22(9):e3002782.
Xu L, Peng F, Luo Q, Ding Y, Yuan F, Zheng L, He W, Zhang SS, Fu X, Liu J et al..  2024.  IRE1α silences dsRNA to prevent taxane-induced pyroptosis in triple-negative breast cancer.. Cell.
Xu L, Peng F, Luo Q, Ding Y, Yuan F, Zheng L, He W, Zhang SS, Fu X, Liu J et al..  2024.  IRE1α silences dsRNA to prevent taxane-induced pyroptosis in triple-negative breast cancer.. Cell.
Xu L, Peng F, Luo Q, Ding Y, Yuan F, Zheng L, He W, Zhang SS, Fu X, Liu J et al..  2024.  IRE1α silences dsRNA to prevent taxane-induced pyroptosis in triple-negative breast cancer.. Cell.
Peale DR, Hess H, Lee P.R, Cardona A, Bock DD, Schneider-Mizell C, Fetter RD, Lee W-P, Robinson CG, Iyer N et al..  2024.  iTome Volumetric Serial Sectioning Apparatus for TEM. bioRxiv.
Duque M, Chen AB, Hsu E, Narayan S, Rymbek A, Begum S, Saher G, Cohen AE, Olson DE, Li Y et al..  2024.  Ketamine induces plasticity in a norepinephrine-astroglial circuit to promote behavioral perseverance.. Neuron. (113):1-15.
Safa ATehrani, Biswas T, Ramakrishnan A, Bhandawat V.  2024.  Leg compliance is required to explain the ground reaction force patterns and speed ranges in different gaits. bioRxiv.
van der Meer W, van Steen ACI, Mahlandt E, Rolas L, Wang H, Arts J, Kempers L, Grönloh M, Schoon RM, Driessen A et al..  2024.  Leukocytes use endothelial membrane tunnels to extravasate the vasculature. bioRxiv.
Rich P.D, Thiberge S.Y, Scott B.B, Guo C., Tervo D.G, Brody C.D, Karpova A.Y, Daw N.D, Tank D.W.  2024.  Magnetic voluntary head-fixation in transgenic rats enables lifetime imaging of hippocampal neurons. Nat. Commun..
Noorman M, Hulse BK, Jayaraman V, Romani S, Hermundstad AM.  2024.  Maintaining and updating accurate internal representations of continuous variables with a handful of neurons.. Nat Neurosci.
Mertens TFabian, Liebheit ATabea, Ehl J, Köhler R, Rakhymzhan A, Woehler A, Katthän L, Ebel G, Liublin W, Kasapi A et al..  2024.  MarShie: a clearing protocol for 3D analysis of single cells throughout the bone marrow at subcellular resolution.. Nature Communincations. 15(1):1764.