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2009
Jain V.  2009.  Machine learning of image analysis with convolutional networks and topological constraints..
Zimmermann G, Wang L-P, Vaughan AG, Manoli DS, Zhang F, Deisseroth K, Baker BS, Scott MP.  2009.  Manipulation of an innate escape response in Drosophila: photoexcitation of acj6 neurons induces the escape response.. PLoS One. 4(4):e5100.
Simpson JH.  2009.  Mapping and manipulating neural circuits in the fly brain.. Advances in Genetics. 65:79-143.
Song Q, Smith SA, Gao L, Xu W, Volný M, Ouyang Z, R Cooks G.  2009.  Mass selection of ions from beams using waveform isolation in radiofrequency quadrupoles.. Analytical Chemistry. 81(5):1833-40.
Turaga SC, Briggman K, Helmstaedter MN, Denk W, Seung S.  2009.  Maximin affinity learning of image segmentation. Advances in Neural Information Processing Systems 22 (NIPS 2009). 22
Wen Q, Stepanyants A, Elston GN, Grosberg AY, Chklovskii DB.  2009.  Maximization of the connectivity repertoire as a statistical principle governing the shapes of dendritic arbors.. Proceedings of the National Academy of Sciences of the United States of America. 106(30):12536-41.
DeBartolo J, Colubri A, Jha AK, Fitzgerald JE, Freed KF, Sosnick TR.  2009.  Mimicking the folding pathway to improve homology-free protein structure prediction.. Proceedings of the National Academy of Sciences of the United States of America. 106(10):3734-9.
Marvin JS, Looger LL.  2009.  Modulating protein interactions by rational and computational design.. Protein Engineering and Design. :343-66.
Srinivasan DG, Ano L, Davis GK, Stern DL.  2009.  Molecular Basis of Facultative Asexuality in Aphids. Society for Integrative and Comparative Biology. 49:E308-E308.
Chen JZ, Settembre EC, Aoki ST, Zhang X, A Bellamy R, Dormitzer PR, Harrison SC, Grigorieff N.  2009.  Molecular interactions in rotavirus assembly and uncoating seen by high-resolution cryo-EM.. Proceedings of the National Academy of Sciences of the United States of America. 106(26):10644-8.
Hiruma K, Riddiford LM.  2009.  The molecular mechanisms of cuticular melanization: the ecdysone cascade leading to dopa decarboxylase expression in Manduca sexta.. Insect Biochemistry and Molecular Biology. 39(4):245-53.
Li W, Pan Y, Wang Z, Gong H, Gong Z, Liu L.  2009.  Morphological characterization of single fan-shaped body neurons in Drosophila melanogaster.. Cell and Tissue Research. 336(3):509-19.
Kainmueller D, Lamecker H, Seim H, Zachow S.  2009.  Multi-object segmentation of head bones.. MIDAS Journal.
Kainmueller D, Lamecker H, Zachow S.  2009.  Multi-object segmentation with coupled deformable models.. Annals of the British Machine Vision Association. 2009(5):1-10.
Lewis TL, Mao T, Svoboda K, Arnold DB.  2009.  Myosin-dependent targeting of transmembrane proteins to neuronal dendrites.. Nature Neuroscience. 12(5):568-76.
Johnson EL, Fetter RD, Davis GW.  2009.  Negative regulation of active zone assembly by a newly identified SR protein kinase.. PLoS Biology. 7(9):e1000193.
Cardona A, Larsen C, Hartenstein V..  2009.  Neuronal fiber tracts connecting the brain and ventral nerve cord of the early Drosophila larva.. The Journal of Comparative Neurology. 515(4):427-40.
Carmine-Simmen K, Proctor T, Tschäpe J, Poeck B, Triphan T, Strauss R, Kretzschmar D.  2009.  Neurotoxic effects induced by the Drosophila amyloid-beta peptide suggest a conserved toxic function.. Neurobiology of Disease. 33(2):274-81.
Eddy SR.  2009.  A new generation of homology search tools based on probabilistic inference.. Genome Informatics. International Conference on Genome Informatics. 23(1):205-11.
Lee T.  2009.  New genetic tools for cell lineage analysis in Drosophila.. Nature Methods. 6(8):566-8.
Huston SJ, Krapp HG.  2009.  Nonlinear integration of visual and haltere inputs in fly neck motor neurons.. The Journal of Neuroscience: The Official Journal of the Society for Neuroscience. 29(42):13097-105.
Tomar RS, Psathas JN, Zhang H, Zhang Z, Reese JC.  2009.  A novel mechanism of antagonism between ATP-dependent chromatin remodeling complexes regulates RNR3 expression.. Molecular and Cellular Biology. 29(12):3255-65.
Erezyilmaz DF, Kelstrup HC, Riddiford LM.  2009.  The nuclear receptor E75A has a novel pair-rule-like function in patterning the milkweed bug, Oncopeltus fasciatus.. Developmental Biology. 334(1):300-10.
Lin S, Huang Y, Lee T.  2009.  Nuclear receptor unfulfilled regulates axonal guidance and cell identity of Drosophila mushroom body neurons.. PLoS One. 4(12):e8392.
Chen T-W, Lin B-J, Schild D.  2009.  Odor coding by modules of coherent mitral/tufted cells in the vertebrate olfactory bulb.. Proceedings of the National Academy of Sciences of the United States of America. 106(7):2401-6.