Biblio

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2013
Crocker J, Stern DL.  2013.  TALE-mediated modulation of transcriptional enhancers in vivo.. Nature Methods. 10(8):762-7.
Kapfhamer D, Taylor S, Zou ME, Lim JP, Kharazia V, Heberlein U.  2013.  Taok2 controls behavioral response to ethanol in mice.. Genes, Brain, and Behavior. 12(1):87-97.
Hires SAndrew, Pammer L, Svoboda K, Golomb D.  2013.  Tapered whiskers are required for active tactile sensation.. eLife. 2:e01350.
Trcek T, Sato H, Singer RH, Maquat LE.  2013.  Temporal and spatial characterization of nonsense-mediated mRNA decay.. Genes & Development. 27(5):541-51.
Rah J-C, Bas E, Colonell J, Mishchenko Y, Karsh B, Fetter RD, Myers EW, Chklovskii DB, Svoboda K, Harris TD et al..  2013.  Thalamocortical input onto layer 5 pyramidal neurons measured using quantitative large-scale array tomography.. Frontiers in Neural Circuits. 7:177.
Shi D, Nannenga BL, Iadanza MG, Gonen T.  2013.  Three-dimensional electron crystallography of protein microcrystals.. eLife. 2:01345.
Fiolka R.  2013.  Three-dimensional live microscopy beyond the diffraction limit.. Journal of Optics. 15:094002.
Wu B, Singer RH, Mueller JD.  2013.  Time-integrated fluorescence cumulant analysis and its application in living cells.. Methods in Enzymology. 518:99-119.
Amat F, Keller PJ.  2013.  Towards comprehensive cell lineage reconstructions in complex organisms using light-sheet microscopy.. Development, Growth and Differentiation. 55(4):563-78.
Cardona A..  2013.  Towards semi-automatic reconstruction of neural circuits.. Neuroinformatics. 11(1):31-3.
Paraq T, Butler V, Chklovskii D.  2013.  Tracking multiple neurons on worm images.. Medical Imaging 2013: Image Processing. 8669:86692P.
Davis FP, Eddy SR.  2013.  Transcription factors that convert adult cell identity are differentially polycomb repressed.. PLoS One. 8(5):e63407.
Satou C, Kimura Y, Hirata H, Suster ML, Kawakami K, Higashijima S-I.  2013.  Transgenic tools to characterize neuronal properties of discrete populations of zebrafish neurons. Development. 140:3927-3931.
Coggill P, Eberhardt RY, Finn RD, Chang Y, Jaroszewski L, Godzik A, Das D, Xu Q, Axelrod HL, Aravind L et al..  2013.  Two Pfam protein families characterized by a crystal structure of protein lpg2210 from Legionella pneumophila.. BMC Bioinformatics. 14:265.
Ahrens MB*, Huang KHua*, Narayan S, Mensh BD, Engert F.  2013.  Two-photon calcium imaging during fictive navigation in virtual environments.. Frontiers in Neural Circuits. 7:104.
Borghuis BG, Marvin JS, Looger LL, Demb JB.  2013.  Two-photon imaging of nonlinear glutamate release dynamics at bipolar cell synapses in the mouse retina.. The Journal of Neuroscience : The Official Journal of the Society for Neuroscience. 33(27):10972-85.
2012
Khmelinskii A, Keller PJ, Bartosik A, Meurer M, Barry JD, Mardin BR, Kaufmann A, Trautmann S, Wachsmuth M, Pereira G et al..  2012.  Tandem fluorescent protein timers for in vivo analysis of protein dynamics.. Nature Biotechnology. 30(7):708-14.
Kim Y, Spruston N.  2012.  Target-specific output patterns are predicted by the distribution of regular-spiking and bursting pyramidal neurons in the subiculum.. Hippocampus. 22(4):693-706.
Fiolka R, Shao L, E Rego H, Davidson MW, Gustafsson MGL.  2012.  Time-lapse two-color 3D imaging of live cells with doubled resolution using structured illumination.. Proceedings of the National Academy of Sciences of the United States of America. 109(14):5311-5.
Joseph RM, Heberlein U.  2012.  Tissue-specific activation of a single gustatory receptor produces opposing behavioral responses in Drosophila.. Genetics. 192(2):521-32.
Madisen L, Mao T, Koch H, Zhuo J-min, Berenyi A, Fujisawa S, Hsu Y-WA, Garcia AJ, Gu X, Zanella S et al..  2012.  A toolbox of Cre-dependent optogenetic transgenic mice for light-induced activation and silencing.. Nature Neuroscience. 15(5):793-802.
Cardona A, Saalfeld S, Schindelin J, Arganda-Carreras I, Preibisch S, Longair M, Tomancak P, Hartenstein V, Douglas RJ.  2012.  TrakEM2 software for neural circuit reconstruction.. PLoS One. 7:e38011.
Cardona A, Saalfeld S, Schindelin J, Arganda-Carreras I, Preibisch S, Longair M, Tomancak P, Hartenstein V, Douglas RJ.  2012.  TrakEM2 software for neural circuit reconstruction.. PLoS One. 7(6):e38011.
Lionnet T, Singer RH.  2012.  Transcription goes digital.. EMBO Reports. 13(4):313-21.
Revyakin A, Zhang Z, Coleman RA, Li Y, Inouye C, Lucas JK, Park S-R, Chu S, Tjian R.  2012.  Transcription initiation by human RNA polymerase II visualized at single-molecule resolution.. Genes & Development. 26:1691-702.