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2025
Wolff T, Eddison M, Chen N, Nern A, Sundaramurthi P, Sitaraman D, Rubin GM.  2025.  Cell type-specific driver lines targeting the Drosophila central complex and their use to investigate neuropeptide expression and sleep regulation. elife.
Pjanovic V, Zavatone-Veth JA, Masset P, Keemink SW, Nardin M.  2025.  Combining Sampling Methods with Attractor Dynamics in Spiking Models of Head-Direction Systems. bioRxiv.
Pentimalli TMassimo, Schallenberg S, León-Periñán D, Legnini I, Theurillat I, Thomas G, Boltengagen A, Fritzsche S, Nimo J, Ruff L et al..  2025.  Combining spatial transcriptomics and ECM imaging in 3D for mapping cellular interactions in the tumor microenvironment.. Cell Syst. :101261.
Stürner T, Brooks P, Capdevila LSerratosa, Morris BJ, Javier A, Fang S, Gkantia M, Cachero S, Beckett IR, Marin EC et al..  2025.  Comparative connectomics of Drosophila descending and ascending neurons.. Nature.
Erginkaya M, Cruz T, Brotas M, Steck K, Nern A, Torrão F, Varela N, Bock D, Reiser M, M Chiappe E.  2025.  A competitive disinhibitory network for robust optic flow processing in Drosophila. Nat Neurosci..
Cai C, Traubert O, Tormes-Vaquerano J, M Eybposh H, Turaga SC, Rodriguez-Romaguera J, Naumann EA, Pégard NC.  2025.  Compressive streak microscopy for fast sampling of fluorescent reporters of neural activity.. Neurophotonics. 12(2):025013.
Zocchi D, Nguyen M, Marquez-Legorreta E, Siwanowicz I, Singh C, Prober DA, Hillman EMC, Ahrens MB.  2025.  Days-old zebrafish rapidly learn to recognize threatening agents through noradrenergic and forebrain circuits.. Curr Biol. 35(1):163-176.e4.
Castro P.S, Tomasev N., Anand A., Sharma N., Mohanta R., Perlin K., Jain S., Levin K., Éltető N., Dabney W. et al..  2025.  Discovering Symbolic Cognitive Models from Human and Animal Behavior.. bioRxiv.
Mi X, Chen ABo-Yuan, Duarte D, Carey E, Taylor CR, Braaker PN, Bright M, Almeida RG, Lim J-X, Ruetten VMS et al..  2025.  Fast, accurate, and versatile data analysis platform for the quantification of molecular spatiotemporal signals.. Cell.
Aggarwal A, Negrean A, Chen Y, Iyer R, Reep D, Liu A, Palutla A, Xie ME, MacLennan BJ, Hagihara KM et al..  2025.  Glutamate indicators with increased sensitivity and tailored deactivation rates. bioRxiv.
Podgorski K, Aggarwal A, Negrean A, Chen Y, Iyer R, Reep D, Liu A, Palutla A, Xie M, Maclennan B et al..  2025.  Glutamate indicators with increased sensitivity and tailored deactivation rates. Research Square.
Sun W, Winnubst J, Natrajan M, Lai C, Kajikawa K, Michaelos M, Gattoni R, Stringer C, Flickinger D, Fitzgerald JE et al..  2025.  Learning produces an orthogonalized state machine in the hippocampus.. Nature. 640
Chiossi HSC, Nardin M, Tkačik G, Csicsvari JL.  2025.  Learning reshapes the hippocampal representation hierarchy. Proc. Natl. Acad. Sci. U.S.A..
Fiore A, Yu G, Northey JJ, Patel R, Ravenscroft TA, Ikegami R, Kolkman W, Kumar P, Dilan TL, Ruetten VMS et al..  2025.  Live imaging of the extracellular matrix with a glycan-binding fluorophore.. Nat Methods.
Nakamura K, Aoyama-Ishiwatari S, Nagao T, Paaran M, Obara CJ, Sakurai-Saito Y, Johnston J, Du Y, Suga S, Tsuboi M et al..  2025.  Mitochondrial complexity is regulated at ER-mitochondria contact sites via PDZD8-FKBP8 tethering.. Nat Commun. 16(1):3401.
Nakamura K, Aoyama-Ishiwatari S, Nagao T, Paaran M, Obara CJ, Sakurai-Saito Y, Johnston J, Du Y, Suga S, Tsuboi M et al..  2025.  Mitochondrial complexity is regulated at ER-mitochondria contact sites via PDZD8-FKBP8 tethering.. Nat Commun. 16(1):3401.
Nakamura K, Aoyama-Ishiwatari S, Nagao T, Paaran M, Obara CJ, Sakurai-Saito Y, Johnston J, Du Y, Suga S, Tsuboi M et al..  2025.  Mitochondrial complexity is regulated at ER-mitochondria contact sites via PDZD8-FKBP8 tethering.. Nat Commun. 16(1):3401.
Fu T-M, Liu G, Milkie DE, Ruan X, Görlitz F, Shi Y, Ferro V, Divekar NS, Wang W, York HM et al..  2025.  A Multimodal Adaptive Optical Microscope For In Vivo Imaging from Molecules to Organisms. bioRxiv.
Fu T-M, Liu G, Milkie DE, Ruan X, Görlitz F, Shi Y, Ferro V, Divekar NS, Wang W, York HM et al..  2025.  A Multimodal Adaptive Optical Microscope For In Vivo Imaging from Molecules to Organisms. bioRxiv.
Lakunina A, Socha KZ, Ladd A, Bowen AJ, Chen S, Colonell J, Doshi A, Karsh B, Krumin M, Kulik P et al..  2025.  Neuropixels Opto: Combining high-resolution electrophysiology and optogenetics. bioRxiv.
Ehrhardt E, Whitehead SC, Namiki S, Minegishi R, Siwanowicz I, Feng K, Otsuna H, Team FLProject, Meissner GW, Stern D et al..  2025.  Single-cell type analysis of wing premotor circuits in the ventral nerve cord of Drosophila melanogaster. eLife.
Furman D, Auwerx J, Bulteau A-L, Church G, Couturaud V, Crabbe L, Davies KJA, Decottignies A, Gladyshev VN, Kennedy BK et al..  2025.  Skin health and biological aging.. Nat Aging.
Furman D, Auwerx J, Bulteau A-L, Church G, Couturaud V, Crabbe L, Davies KJA, Decottignies A, Gladyshev VN, Kennedy BK et al..  2025.  Skin health and biological aging.. Nat Aging.
Voigts J, Kanitscheider I, Miller NJ, Toloza EHS, Newman JP, Fiete IR, Harnett MT.  2025.  Spatial reasoning via recurrent neural dynamics in mouse retrosplenial cortex. Nat Neurosci. 28(6):1293-1299.
Qian X, Coleman K, Jiang S, Kriz AJ, Marciano JH, Luo C, Cai C, Manam MDevi, Caglayan E, Otani A et al..  2025.  Spatial transcriptomics reveals human cortical layer and area specification. Nature.