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Main Menu - Block
Labs:
Project Teams:
- Overview
- Anatomy and Histology
- Cryo-Electron Microscopy
- Electron Microscopy
- Flow Cytometry
- Fly Facility
- Gene Targeting and Transgenics
- Immortalized Cell Line Culture
- Integrative Imaging
- Janelia Experimental Technology
- Mass Spectrometry
- Media Prep
- Molecular Genomics
- Primary & iPS Cell Culture
- Project Pipeline Support
- Project Technical Resources
- Quantitative Genomics
- Scientific Computing Software
- Scientific Computing Systems
- Viral Tools
- Vivarium
Book Chapter
Kreshuk A, Funke J, Cardona A, Hamprecht FA.
2015. Who is talking to whom: Synaptic partner detection in anisotropic volumes of insect brain.. Medical Image Computing and Computer-Assisted Intervention -- MICCAI 2015. :661-8.
Journal Article
Kreshuk A, Koethe U, Pax E, Bock DD, Hamprecht FA.
2014. Automated detection of synapses in serial section transmission electron microscopy image stacks.. PloS one. 9:e87351.
Speiser A, Müller L-R, Matti U, Obara CJ, Legant WR, Kreshuk A, Macke JH, Ries J, Turaga SC.
2021. Deep learning enables fast and dense single-molecule localization with high accuracy. Nature Methods. 18(9)
Berg S, Kutra D, Kroeger T, Straehle CN, Kausler BX, Haubold C, Schiegg M, Ales J, Beier T, Rudy M et al..
2019. ilastik: interactive machine learning for (bio)image analysis.. Nature Methods. 16:1226-32.
Beier T, Pape C, Rahaman N, Prange T, Berg S, Bock DD, Cardona A, Knott GW, Plaza SM, Scheffer LK et al..
2017. Multicut brings automated neurite segmentation closer to human performance.. Nature Methods. 14(2):101-102.
Haubold C, Schiegg M, Kreshuk A, Berg S, Koethe U, Hamprecht FA.
2016. Segmenting and Tracking Multiple Dividing Targets Using ilastik.. Advances in anatomy, embryology, and cell biology. 219:199-229.
Peddie CJ, Genoud C, Kreshuk A, Meechan K, Micheva KD, Narayan K, Pape C, Parton RG, Schieber NL, Schwab Y et al..
2022. Volume electron microscopy.. Nature Reviews: Methods Primers. 2:51.