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2019
Rubel O, Tritt A, Dichter B, Braun T, Cain N, Clack NG, Davidson TJ, Dougherty M, Fillion-Rubin J-C, Graddis N et al..  2019.  NWB:N 2.0: An accessible data standard for neurophysiology.. bioRxiv.
Shurer CR, Kuo JChin-Hun, Roberts LDMonét, Gandhi JG, Colville MJ, Enoki TA, Pan H, Su J, Noble JM, Hollander MJ et al..  2019.  Physical Principles of Membrane Shape Regulation by the Glycocalyx. Cell. 177(7):1757-1770.e21.
Winnubst J, Bas E, Ferreira TA, Wu Z, Economo MN, Edson P, Arthur BJ, Bruns C, Rokicki K, Schauder D et al..  2019.  Reconstruction of 1,000 projection neurons reveals new cell types and organization of long-range connectivity in the mouse brain.. Cell. 179(1):268-81.
Khaliullin RN, Hendel JM, Gerson-Gurwitz A, Wang S, Ochoa SD, Zhao Z, Desai A, Oegema K, Green RA.  2019.  A Semi-high-throughput Imaging Method and Data Visualization Toolkit to Analyze C. elegans Embryonic Development. Journal of Visualized Experiments. (152)
Khaliullin RN, Hendel JM, Gerson-Gurwitz A, Wang S, Ochoa SD, Zhao Z, Desai A, Oegema K, Green RA.  2019.  A Semi-high-throughput Imaging Method and Data Visualization Toolkit to Analyze C. elegans Embryonic Development. Journal of Visualized Experiments. (152)
O’Shaughnessy EC, Stone OJ, LaFosse PK, Azoitei ML, Tsygankov D, Heddleston JM, Legant WR, Wittchen ES, Burridge K, Elston TC et al..  2019.  Software for lattice light-sheet imaging of FRET biosensors, illustrated with a new Rap1 biosensor.. The Journal of Cell Biology. 218(9):3153-3160.
Engelhard B, Finkelstein J, Cox J, Fleming W, Jang HJae, Ornelas S, Koay SAnn, Thiberge SY, Daw ND, Tank DW et al..  2019.  Specialized coding of sensory, motor and cognitive variables in VTA dopamine neurons. Nature. 570(7762):509-513.
Speiser A, Müller L-R, Matti U, Obara CJ, Legant WR, Ries J, Macke JH, Turaga SC.  2019.  Teaching deep neural networks to localize single molecules for super-resolution microscopy. arXiv e-prints. :arXiv:1907.00770.
2018
Tian L, Or G, Wang Y, Shi G, Wang Y, Sun J, Papadopoulos S, Broussard G, Unger E, Deng W et al..  2018.  Aberrant calcium signaling in astrocytes inhibits neuronal excitability in a human Down syndrome stem cell model.. Cell Reports. 24(2):355-65.
McArthur K, Whitehead LW, Heddleston JM, Li L, Padman BS, Oorschot V, Geoghegan ND, Chappaz S, Davidson S, San Chin H et al..  2018.  BAK/BAX macropores facilitate mitochondrial herniation and mtDNA efflux during apoptosis.. Science (New York, N.Y.). 359(6378)
McArthur K, Whitehead LW, Heddleston JM, Li L, Padman BS, Oorschot V, Geoghegan ND, Chappaz S, Davidson S, San Chin H et al..  2018.  BAK/BAX macropores facilitate mitochondrial herniation and mtDNA efflux during apoptosis.. Science (New York, N.Y.). 359(6378)
Deverett B, Koay SAnn, Oostland M, Wang SS-H.  2018.  Cerebellar involvement in an evidence-accumulation decision-making task. eLife. 7
Deverett B, Koay SAnn, Oostland M, Wang SS-H.  2018.  A cerebellar role in evidence-guided decision-making. bioRxiv.
Otsuna H, Ito M, Kawase T.  2018.  Color depth MIP mask search: a new tool to expedite Split-GAL4 creation.. bioRxiv.
Ben Noon EPreger-, Sabarís G, Ortiz DM, Sager J, Liebowitz A, Stern DL, Frankel N.  2018.  Comprehensive analysis of a cis-regulatory region reveals pleiotropy in enhancer function.. Cell Reports. 22(11):3021-3031.
Lee K-Y, Green RA, Gutierrez E, J Gomez-Cavazos S, Kolotuev I, Wang S, Desai A, Groisman A, Oegema K.  2018.  CYK-4 functions independently of its centralspindlin partner ZEN-4 to cellularize oocytes in germline syncytia. eLife. 7:e36919.
Peters R, Griffié J, Williamson D, Aaron J, Khuon S, Owen D.  2018.  Development of 2-colour and 3D SMLM data analysis methods for fibrous spatial point patterns.. Journal of Physics D: Applied Physics. 52(1):1.
Yu Z, Surface LE, Park CYon, Horlbeck MA, Wyant GA, Abu-Remaileh M, Peterson TR, Sabatini DM, Weissman JS, O'Shea EK.  2018.  Identification of a transporter complex responsible for the cytosolic entry of nitrogen-containing-bisphosphonates.. eLife. 7
Moeyaert B, Holt G, Madangopal R, Perez-Alvarez A, Fearey BC, Trojanowski NF, Ledderose J, Zolnik TA, Das A, Patel D et al..  2018.  Improved methods for marking active neuron populations.. Nature Communications. 9(1):4440.
Felsenberg J, Jacob PF, Walker T, Barnstedt O, Edmondson-Stait AJ, Pleijzier MW, Otto N, Schlegel P, Sharifi N, Perisse E et al..  2018.  Integration of parallel opposing memories underlies memory extinction.. Cell. 175(3):709-22.
Chorro L, Suzuki M, Chin SShien, Williams TM, Snapp EL, Odagiu L, Labrecque N, Lauvau G.  2018.  Interleukin 2 modulates thymic-derived regulatory T cell epigenetic landscape.. Nature Communications. 9(1):5368.
Attardo A, Lu J, Kawashima T, Okuno H, Fitzgerald JE, Bito H, Schnitzer MJ.  2018.  Long-Term Consolidation of Ensemble Neural Plasticity Patterns in Hippocampal Area CA1.. Cell reports. 25(3):640-650.e2.
Zhao T, Olbris DJ, Yu Y, Plaza SM.  2018.  NeuTu: Software for Collaborative, Large-Scale, Segmentation-Based Connectome Reconstruction.. Frontiers in Neural Circuits. 12:101.
Burgos A, Honjo K, Ohyama T, Qian CSam, Shin GJi-Eun, Gohl DM, Silies M, W Tracey D, Zlatic M, Cardona A et al..  2018.  Nociceptive interneurons control modular motor pathways to promote escape behavior in Drosophila.. eLife. 7
Omari S, Makareeva E, Roberts-Pilgrim A, Mirigian L, Jarnik M, Ott C, Lippincott-Schwartz J, Leikin S.  2018.  Noncanonical autophagy at ER exit sites regulates procollagen turnover.. Proceedings of the National Academy of Sciences of the United States of America. 115(43):E10099-108.