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Fushiki A, Zwart MF, Kohsaka H, Fetter RD, Cardona A, Nose A.  2016.  A circuit mechanism for the propagation of waves of muscle contraction in Drosophila.. eLife. 5
Fuqua T, Jordan J, van Breugel MElize, Halavatyi A, Tischer C, Polidoro P, Abe N, Tsai A, Mann RS, Stern DL et al..  2020.  Dense and pleiotropic regulatory information in a developmental enhancer.. Nature. 587(7833):235-39.
Fuqua T, Jordan J, Halavatyi A, Tischer C, Richter K, Crocker J.  2021.  An open-source semi-automated robotics pipeline for embryo immunohistochemistry.. Scientific Reports. 11(1):10314.
Funke J, Klein J, Moreno-Noguer F, Cardona A, Cook M.  2017.  TED: A Tolerant Edit Distance for segmentation evaluation.. Methods. 115:119-27.
Funke J, Zhang C, Pietzsch T, Ballester MAGonzalez, Saalfeld S.  2017.  The candidate multi-cut for cell segmentation.. 2018 IEEE 15th International Symposium on Biomedical Imaging (ISBI 2018).
Funke J, Andres B, Hamprecht F, Cardona A, Cook M.  2012.  Efficient automatic 3D-reconstruction of branching neurons from EM data.. Computer Vision and Pattern Recognition (CVPR), 2012 IEEE Conference on.
Funke J, Klein J, Moreno-Noguer F, Cardona A, Cook M.  2016.  Structured learning of assignment models for neuron reconstruction to minimize topological errors.. IEEE 13th International Symposium on Biomedical Imaging (ISBI). :607-11.
Funke J, Tschopp FD, Grisaitis W, Sheridan A, Singh C, Saalfeld S, Turaga SC.  2019.  Large scale image segmentation with structured loss based deep learning for connectome reconstruction.. IEEE Transactions on Pattern Analysis and Machine Intelligence. 41(7):1669-80.
Fuller SBuckminste, Straw AD, Peek MY, Murray RM, Dickinson MH.  2014.  Flying Drosophila stabilize their vision-based velocity controller by sensing wind with their antennae.. Proceedings of the National Academy of Sciences of the United States of America. 111(13):E1182-91.
Fuller CW, Middendorf LR, Benner SA, Church GM, Harris T, Huang X, Jovanovich SB, Nelson JR, Schloss JA, Schwartz DC et al..  2009.  The challenges of sequencing by synthesis.. Nature Biotechnology. 27:1013-23.
Fukudome A, Singh J, Mishra V, Reddem E, Martinez-Marquez F, Wenzel S, Yan R, Shiozaki M, Yu Z, Wang JChe-Yen et al..  2021.  Structure and RNA template requirements of RNA-DEPENDENT RNA POLYMERASE 2.. Proceedings of the National Academy of Sciences of the U.S.A.. 118(51)
Fu D, Lippincott-Schwartz J, Arias IM.  2013.  Increased mitochondrial fusion and autophagy help isolated hepatocytes repolarize in collagen sandwich cultures.. Autophagy. 9(12):2154-5.
Fu D, Wakabayashi Y, Ido Y, Lippincott-Schwartz J, Arias IM.  2010.  Regulation of bile canalicular network formation and maintenance by AMP-activated protein kinase and LKB1.. Journal of cell science. 123(Pt 19):3294-302.
Fu D, Wakabayashi Y, Lippincott-Schwartz J, Arias IM.  2011.  Bile acid stimulates hepatocyte polarization through a cAMP-Epac-MEK-LKB1-AMPK pathway.. Proceedings of the National Academy of Sciences of the United States of America. 108(4):1403-8.
Fu D, Lippincott-Schwartz J.  2018.  Monitoring the effects of pharmacological reagents on mitochondrial morphology.. Current Protocols in Cell Biology. 79(1):e45.
Fu D, Lippincott-Schwartz J, Arias IM.  2011.  Cellular mechanism of bile acid-accelerated hepatocyte polarity.. Small GTPases. 2(6):314-317.
Fu D, Mitra K, Sengupta P, Jarnik M, Lippincott-Schwartz J, Arias IM.  2013.  Coordinated elevation of mitochondrial oxidative phosphorylation and autophagy help drive hepatocyte polarization.. Proceedings of the National Academy of Sciences of the United States of America. 110(18):7288-93.
Frost NA, Shroff H, Kong H, Betzig E, Blanpied TA.  2010.  Single-molecule discrimination of discrete perisynaptic and distributed sites of actin filament assembly within dendritic spines. (With commentary). Neuron. 67(1):86-99.
Fritzsche M, Fernandes RA, Chang VT, Colin-York H, Clausen MP, Felce JH, Galiani S, Erlenkämper C, Santos AM, Heddleston JM et al..  2017.  Cytoskeletal actin dynamics shape a ramifying actin network underpinning immunological synapse formation.. Science Advances. 3(6):e1603032.
Fritzsche M, Li D, Colin-York H, Chang VT, Moeendarbary E, Felce JH, Sezgin E, Charras G, Betzig E, Eggeling C.  2017.  Self-organizing actin patterns shape membrane architecture but not cell mechanics.. Nature Communications. 8:14347.
Fritz-Laylin LK, Riel-Mehan M, Chen B-C, Lord SJ, Goddard TD, Ferrin TE, Nicholson-Dykstra SM, Higgs H, Johnson GT, Betzig E et al..  2017.  Actin-based protrusions of migrating neutrophils are intrinsically lamellar and facilitate direction changes.. eLife. 6
Friedrich J, Yang W, Soudry D, Mu Y, Ahrens MB, Yuste R, Peterka DS, Paninski L.  2017.  Multi-scale approaches for high-speed imaging and analysis of large neural populations.. PLoS Computational Biology. 13(8):e1005685.
Frick A, Magee J, Koester HJ, Migliore M, Johnston D.  2003.  Normalization of Ca2+ signals by small oblique dendrites of CA1 pyramidal neurons.. The Journal of Neuroscience: The Official Journal of the Society for Neuroscience. 23(8):3243-50.
Frick A, Magee J, Johnston D.  2004.  LTP is accompanied by an enhanced local excitability of pyramidal neuron dendrites.. Nature Neuroscience. 7(2):126-35.
Freundt EC, Yu L, Goldsmith CS, Welsh S, Cheng A, Yount B, Liu W, Frieman MB, Buchholz UJ, Screaton GR et al..  2010.  The open reading frame 3a protein of severe acute respiratory syndrome-associated coronavirus promotes membrane rearrangement and cell death.. Journal of virology. 84(2):1097-109.