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49 Publications

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    Reiser LabRubin LabFly Functional Connectome
    12/18/17 | Behavioral state modulates the ON visual motion pathway of Drosophila.
    Strother JA, Wu S, Rogers EM, Eliason JL, Wong AM, Nern A, Reiser MB
    Proceedings of the National Academy of Sciences of the United States of America. 2017 Dec 18;115(1):E102-11. doi: 10.1073/pnas.1703090115

    The behavioral state of an animal can dynamically modulate visual processing. In flies, the behavioral state is known to alter the temporal tuning of neurons that carry visual motion information into the central brain. However, where this modulation occurs and how it tunes the properties of this neural circuit are not well understood. Here, we show that the behavioral state alters the baseline activity levels and the temporal tuning of the first directionally selective neuron in the ON motion pathway (T4) as well as its primary input neurons (Mi1, Tm3, Mi4, Mi9). These effects are especially prominent in the inhibitory neuron Mi4, and we show that central octopaminergic neurons provide input to Mi4 and increase its excitability. We further show that octopamine neurons are required for sustained behavioral responses to fast-moving, but not slow-moving, visual stimuli in walking flies. These results indicate that behavioral-state modulation acts directly on the inputs to the directionally selective neurons and supports efficient neural coding of motion stimuli.

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    10/24/16 | Central brain circuitry for color-vision-modulated behaviors.
    Longden KD
    Current Biology : CB. 2016 Oct 24;26(20):R981-8. doi: 10.1016/j.cub.2016.07.071

    Color is famous for not existing in the external world: our brains create the perception of color from the spatial and temporal patterns of the wavelength and intensity of light. For an intangible quality, we have detailed knowledge of its origins and consequences. Much is known about the organization and evolution of the first phases of color processing, the filtering of light in the eye and processing in the retina, and about the final phases, the roles of color in behavior and natural selection. To understand how color processing in the central brain has evolved, we need well-defined pathways or circuitry where we can gauge how color contributes to the computations involved in specific behaviors. Examples of such pathways or circuitry that are dedicated to processing color cues are rare, despite the separation of color and luminance pathways early in the visual system of many species, and despite the traditional definition of color as being independent of luminance. This minireview presents examples in which color vision contributes to behaviors dominated by other visual modalities, examples that are not part of the canon of color vision circuitry. The pathways and circuitry process a range of chromatic properties of objects and their illumination, and are taken from a variety of species. By considering how color processing complements luminance processing, rather than being independent of it, we gain an additional way to account for the diversity of color coding in the central brain, its consequences for specific behaviors and ultimately the evolution of color vision.

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    04/02/18 | Colour vision: A fresh view of lateral inhibition in Drosophila.
    Longden KD
    Current Biology : CB. 2018 Apr 02;28(7):R308-R311. doi: 10.1016/j.cub.2018.02.052

    A recent study reports a novel form of lateral inhibition between photoreceptors supporting colour vision in the vinegar fly, Drosophila melanogaster.

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    04/18/24 | Connectome-driven neural inventory of a complete visual system
    Aljoscha Nern , Frank Loesche , Shin-ya Takemura , Laura E Burnett , Marisa Dreher , Eyal Gruntman , Judith Hoeller , Gary B Huang , Michal Januszewski , Nathan C Klapoetke , Sanna Koskela , Kit D Longden , Zhiyuan Lu , Stephan Preibisch , Wei Qiu , Edward M Rogers , Pavithraa Seenivasan , Arthur Zhao , John Bogovic , Brandon S Canino , Jody Clements , Michael Cook , Samantha Finley-May , Miriam A Flynn , Imran Hameed , Kenneth J Hayworth , Gary Patrick Hopkins , Philip M Hubbard , William T Katz , Julie Kovalyak , Shirley A Lauchie , Meghan Leonard , Alanna Lohff , Charli A Maldonado , Caroline Mooney , Nneoma Okeoma , Donald J Olbris , Christopher Ordish , Tyler Paterson , Emily M Phillips , Tobias Pietzsch , Jennifer Rivas Salinas , Patricia K Rivlin , Ashley L Scott , Louis A Scuderi , Satoko Takemura , Iris Talebi , Alexander Thomson , Eric T Trautman , Lowell Umayam , Claire Walsh , John J Walsh , C Shan Xu , Emily A Yakal , Tansy Yang , Ting Zhao , Jan Funke , Reed George , Harald F Hess , Gregory S X E Jefferis , Christopher Knecht , Wyatt Korff , Stephen M Plaza , Sandro Romani , Stephan Saalfeld , Louis K Scheffer , Stuart Berg , Gerald M Rubin , Michael B Reiser
    bioRxiv. 2024 Apr 18:. doi: 10.1101/2024.04.16.589741

    Vision provides animals with detailed information about their surroundings, conveying diverse features such as color, form, and movement across the visual scene. Computing these parallel spatial features requires a large and diverse network of neurons, such that in animals as distant as flies and humans, visual regions comprise half the brain’s volume. These visual brain regions often reveal remarkable structure-function relationships, with neurons organized along spatial maps with shapes that directly relate to their roles in visual processing. To unravel the stunning diversity of a complex visual system, a careful mapping of the neural architecture matched to tools for targeted exploration of that circuitry is essential. Here, we report a new connectome of the right optic lobe from a male Drosophila central nervous system FIB-SEM volume and a comprehensive inventory of the fly’s visual neurons. We developed a computational framework to quantify the anatomy of visual neurons, establishing a basis for interpreting how their shapes relate to spatial vision. By integrating this analysis with connectivity information, neurotransmitter identity, and expert curation, we classified the 53,000 neurons into 727 types, about half of which are systematically described and named for the first time. Finally, we share an extensive collection of split-GAL4 lines matched to our neuron type catalog. Together, this comprehensive set of tools and data unlock new possibilities for systematic investigations of vision in Drosophila, a foundation for a deeper understanding of sensory processing.

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    07/10/13 | Contributions of the 12 neuron classes in the fly lamina to motion vision.
    Tuthill JC, Nern A, Stephen L. Holtz , Rubin GM, Reiser MB
    Neuron. 07/2013;79:128-140. doi: http://dx.doi.org/10.1016/j.neuron.2013.05.024

    Motion detection is a fundamental neural computation performed by many sensory systems. In the fly, local motion computation is thought to occur within the first two layers of the visual system, the lamina and medulla. We constructed specific genetic driver lines for each of the 12 neuron classes in the lamina. We then depolarized and hyperpolarized each neuron type and quantified fly behavioral responses to a diverse set of motion stimuli. We found that only a small number of lamina output neurons are essential for motion detection, while most neurons serve to sculpt and enhance these feedforward pathways. Two classes of feedback neurons (C2 and C3), and lamina output neurons (L2 and L4), are required for normal detection of directional motion stimuli. Our results reveal a prominent role for feedback and lateral interactions in motion processing and demonstrate that motion-dependent behaviors rely on contributions from nearly all lamina neuron classes.

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    11/24/23 | Different spectral sensitivities of ON- and OFF-motion pathways enhance the detection of approaching color objects in Drosophila.
    Longden KD, Rogers EM, Nern A, Dionne H, Reiser MB
    Nature Communications. 2023 Nov 24;14(1):7693. doi: 10.1038/s41467-023-43566-8

    Color and motion are used by many species to identify salient objects. They are processed largely independently, but color contributes to motion processing in humans, for example, enabling moving colored objects to be detected when their luminance matches the background. Here, we demonstrate an unexpected, additional contribution of color to motion vision in Drosophila. We show that behavioral ON-motion responses are more sensitive to UV than for OFF-motion, and we identify cellular pathways connecting UV-sensitive R7 photoreceptors to ON and OFF-motion-sensitive T4 and T5 cells, using neurogenetics and calcium imaging. Remarkably, this contribution of color circuitry to motion vision enhances the detection of approaching UV discs, but not green discs with the same chromatic contrast, and we show how this could generalize for systems with ON- and OFF-motion pathways. Our results provide a computational and circuit basis for how color enhances motion vision to favor the detection of saliently colored objects.

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    11/24/23 | Different spectral sensitivities of ON- and OFF-motion pathways enhance the detection of approaching color objects in Drosophila.
    Longden KD, Rogers EM, Nern A, Dionne H, Reiser MB
    Nature Communications. 2023 Nov 24;14(1):7693. doi: 10.1038/s41467-023-43566-8

    Color and motion are used by many species to identify salient objects. They are processed largely independently, but color contributes to motion processing in humans, for example, enabling moving colored objects to be detected when their luminance matches the background. Here, we demonstrate an unexpected, additional contribution of color to motion vision in Drosophila. We show that behavioral ON-motion responses are more sensitive to UV than for OFF-motion, and we identify cellular pathways connecting UV-sensitive R7 photoreceptors to ON and OFF-motion-sensitive T4 and T5 cells, using neurogenetics and calcium imaging. Remarkably, this contribution of color circuitry to motion vision enhances the detection of approaching UV discs, but not green discs with the same chromatic contrast, and we show how this could generalize for systems with ON- and OFF-motion pathways. Our results provide a computational and circuit basis for how color enhances motion vision to favor the detection of saliently colored objects.

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    05/05/14 | Direct observation of ON and OFF pathways in the Drosophila visual system.
    Strother JA, Nern A, Reiser MB
    Current Biology. 2014 May 5;24(9):976-83. doi: 10.1016/j.cub.2014.03.017

    Visual motion perception is critical to many animal behaviors, and flies have emerged as a powerful model system for exploring this fundamental neural computation. Although numerous studies have suggested that fly motion vision is governed by a simple neural circuit [1-3], the implementation of this circuit has remained mysterious for decades. Connectomics and neurogenetics have produced a surge in recent progress, and several studies have shown selectivity for light increments (ON) or decrements (OFF) in key elements associated with this circuit [4-7]. However, related studies have reached disparate conclusions about where this selectivity emerges and whether it plays a major role in motion vision [8-13]. To address these questions, we examined activity in the neuropil thought to be responsible for visual motion detection, the medulla, of Drosophila melanogaster in response to a range of visual stimuli using two-photon calcium imaging. We confirmed that the input neurons of the medulla, the LMCs, are not responsible for light-on and light-off selectivity. We then examined the pan-neural response of medulla neurons and found prominent selectivity for light-on and light-off in layers of the medulla associated with two anatomically derived pathways (L1/L2 associated) [14, 15]. We next examined the activity of prominent interneurons within each pathway (Mi1 and Tm1) and found that these neurons have corresponding selectivity for light-on or light-off. These results provide direct evidence that motion is computed in parallel light-on and light-off pathways, demonstrate that this selectivity emerges in neurons immediately downstream of the LMCs, and specify where crucial elements of motion computation occur.

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    03/10/23 | Drosophila antennae are dispensable for gravity orientation
    Nikolay Kladt , Michael B. Reiser
    bioRxiv. 2023 Mar 10:. doi: 10.1101/2023.03.08.531317

    The nearly constant downward force of gravity has powerfully shaped the behaviors of many organisms [1]. Walking flies readily orient against gravity in a behavior termed negative gravitaxis. In Drosophila this behavior is studied by observing the position of flies in vials [24] or simple mazes [59]. These assays have been used to conduct forward-genetic screens [568] and as simple tests of locomotion deficits [1012]. Despite this long history of investigation, the sensory basis of gravitaxis is largely unknown [1]. Recent studies have implicated the antennae as a major mechanosensory input [34], but many details remain unclear. Fly orientation behavior is expected to depend on the direction and amplitude of the gravitational pull, but little is known about the sensitivity of flies to these features of the environment. Here we directly measure the gravity-dependent orientation behavior of flies walking on an adjustable tilted platform, that is inspired by previous insect studies [1316]. In this arena, flies can freely orient with respect to gravity. Our findings indicate that flies are exquisitely sensitive to the direction of gravity’s pull. Surprisingly, this orientation behavior does not require antennal mechanosensory input, suggesting that other sensory structures must be involved.

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    05/01/10 | Drosophila fly straight by fixating objects in the face of expanding optic flow.
    Reiser MB, Dickinson MH
    The Journal of Experimental Biology. 2010 May;213(Pt 10):1771-81. doi: 10.1016/j.cub.2010.06.072

    Flies, like all animals that depend on vision to navigate through the world, must integrate the optic flow created by self-motion with the images generated by prominent features in their environment. Although much is known about the responses of Drosophila melanogaster to rotating flow fields, their reactions to the more complex patterns of motion that occur as they translate through the world are not well understood. In the present study we explore the interactions between two visual reflexes in Drosophila: object fixation and expansion avoidance. As a fly flies forward, it encounters an expanding visual flow field. However, recent results have demonstrated that Drosophila strongly turn away from patterns of expansion. Given the strength of this reflex, it is difficult to explain how flies make forward progress through a visual landscape. This paradox is partially resolved by the finding reported here that when undergoing flight directed towards a conspicuous object, Drosophila will tolerate a level of expansion that would otherwise induce avoidance. This navigation strategy allows flies to fly straight when orienting towards prominent visual features.

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