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Fiji Cell Counter
About the Innovation
A structured process for the manual count of particles (e.g., cell bodies) in 2D and 3D images of any kind with a graphical mark-up in the image. For flexibility reasons, this tool was implemented as a macro-set for fiji/ImageJ (version 1.47h).
- Download and decompress the file behind the download link below,
- Copy the result into the 'macros' folder of your fiji/ImageJ,
- Restart fiji/imageJ,
- Install tool into fiji/imageJ from the menu: Plugins>Macros>Install...
Successful installation will generate two new buttons ('RGB' and '?') in fiji/imageJ.
The '?' button will display more help on the function of the tool.
By clicking on the links on the right of the page, to download the software, you agree to the terms of the Janelia Open-Source Software License linked here.
For inquiries, please reference: