filters_region_cap | custom
Filter
facetapi-pgRfWYqrhPMD52raw6i9hOTpyOdyNzrw | block
Tool Types
facetapi-9IEMdzz8Rje4Zk6OgEzOgk0TZtQUyZvd | block
Labs and Teams
- Keller Lab (7) Apply Keller Lab filter
- Ahrens Lab (2) Apply Ahrens Lab filter
- Betzig Lab (1) Apply Betzig Lab filter
- FlyEM (1) Apply FlyEM filter
- Harris Lab (1) Apply Harris Lab filter
- Janelia Experimental Technology (1) Apply Janelia Experimental Technology filter
- Lavis Lab (1) Apply Lavis Lab filter
- MouseLight (1) Apply MouseLight filter
- Scientific Computing Software (1) Apply Scientific Computing Software filter
- Spruston Lab (1) Apply Spruston Lab filter
- Svoboda Lab (1) Apply Svoboda Lab filter
facetapi-YKtJxnH4W9g7qU3K3LbP9vb50cdHrdeU | block
Application/Experiment
- Remove Imaging filter Imaging
open_science_search_page-panel_pane_1 | views_panes
13 Results
Showing 1-10 of 13 resultsYour Criteria:
Tools
Efficient processing and analysis of large-scale light-sheet microscopy data
Light-sheet microscopy is a powerful method for imaging the development and function of complex biological systems at high spatiotemporal resolution and over long time scales. Such experiments...
Tools
GALA
Powerful Software Tools for Nanometer-Resolution EM Neuro-image Large Stacks' Segmentation
Image segmentation, a fundamental problem in computer vision, concerns the division of...
Tools
High-throughput multiview image registration for SiMView microscopy
High-throughput multiview image registration for SiMView microscopy
This archive contains our custom software tools for registration and fusion of simultaneous multi-view (SiMView)...
Tools
Image processing and analysis of whole-brain functional recordings
Image processing and analysis of whole-brain functional recordings
Brain function relies on communication between large populations of neurons across multiple brain areas, a full...
Tools
Lattice Light Deconvolution Software - cudaDeconv
Software Description
This open-source executable code is for post-acquisition deconvolution of data produced by the lattice light-sheet microscope developed by Eric Betzig's group at HHMI'...
Tools
OSS - A spherical harmonics framework for whole-embryo mechanics modeling
A spherical harmonics framework for whole-embryo mechanics modeling
We provide the following computer code and programs:
Matlab classes and utility functions for calculating...
Tools
OSS - Fast and robust optical flow for time-lapse microscopy using super-voxels
Optical flow is a key method used for quantitative motion estimation of biological structures in light microscopy. It has also been used as a key module in segmentation and tracking systems and...
Tools
OSS - Fast, accurate reconstruction of cell lineages from large-scale fluorescence microscopy data
The comprehensive reconstruction of cell lineages in complex multicellular organisms is a central goal of developmental biology. We present an open-source computational framework for the...
Tools
Serial Section Alignment
Serial Section Alignment
Configure
Briefly, serial section tomography entails slicing a block of tissue into...
Tools
ShuTu Open-Source Software for Neuron Reconstruction
ShuTu
Configure
ShuTu (Chinese for “dendrite”) is a software platform for semi-automated reconstruction of neuronal morphology. It is designed for neurons stained following patch-...