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2024
Rodríguez C, Pan D, Natan RG, Mohr MA, Miao M, Chen X, Northen TR, Vogel JP, Ji N.  2024.  Adaptive optical third-harmonic generation microscopy for in vivo imaging of tissues. bioRxiv.
Updegrove TB, Delerue T, Anantharaman V., Cho H, Chan C, Nipper T, Choo-Wosoba H, Jenkins L, Zhang L, Su Y et al..  2024.  Altruistic feeding and cell-cell signaling during bacterial differentiation actively enhance phenotypic heterogeneity. bioRxiv.
Bao L, Fu L, Su Y, Chen Z, Peng Z, Sun L, Gonzalez FJ, Wu C, Zhang H, Shi B et al..  2024.  Amino acid transporter SLC7A5 regulates cell proliferation and secretary cell differentiation and distribution in the mouse intestine. Int J Biol Sci. 20(6):2187-2201.
Breimann L, Bahry E, Zouinkhi M, Kolyvanov K, Street LAnnika, Preibisch S, Ercan S.  2024.  Analysis of developmental gene expression using smFISH and in silico staging of C. elegans embryos. bioRxiv.
Man B, Kim E, Vadlakonda A, Stern DL, Crown N.  2024.  Analysis of meiotic recombination in Drosophila simulans shows heterozygous inversions do not cause an interchromosomal effect. Genetics.
Barrero DJ, Wijeratne SS, Zhao X, Cunningham GF, Yan R, Nelson CR, Arimura Y, Funabiki H, Asbury CL, Yu Z et al..  2024.  Architecture and flexibility of native kinetochores revealed by structural studies utilizing a thermophilic yeast. bioRxiv.
Athreya A, Xie L, Tjian R, Zhang B, Liu ZJ.  2024.  Assessing the impact of Brd2 depletion on chromatin compartmentalization. bioRxiv.
Ahrens MB, Khakh BS, Poskanzer KE.  2024.  Astrocyte Calcium Signaling. Cold Spring Harb Perspect Biol.
2023
Proskurin M, Manakov M, Karpova AY.  2023.  ACC neural ensemble dynamics are structured by strategy prevalence. eLife.
Selfe JS, Steyn TJS, Shorer EF, Burman RJ, Düsterwald KM, Abdelfattah AS, Schreiter ER, Newey SE, Akerman CJ, Raimondo JV.  2023.  All-optical reporting of chloride ion driving force in the nervous system. bioRxiv.
Selfe JS, Steyn TJS, Shorer EF, Burman RJ, Düsterwald KM, Abdelfattah AS, Schreiter ER, Newey SE, Akerman CJ, Raimondo JV.  2023.  All-optical reporting of inhibitory receptor driving force in the nervous system.. bioRxiv.
Stagkourakis S, Spigolon G, Marks M, Feyder M, Kim J, Perona P, Pachitariu M, Anderson DJ.  2023.  Anatomically distributed neural representations of instincts in the hypothalamus.. bioRxiv.
Bharathan NKrishnan, Giang W, Hoffman CL, Aaron JS, Khuon S, Chew T-L, Preibisch S, Trautman ET, Heinrich L, Bogovic J et al..  2023.  Architecture and dynamics of a desmosome-endoplasmic reticulum complex.. Nature Cell Biology. 25(6):823-835.
Chen C-L, Aymanns F, Minegishi R, Matsuda VDV, Talabot N, Günel S, Dickson BJ, Ramdya P.  2023.  Ascending neurons convey behavioral state to integrative sensory and action selection centers in the brain. Nature Neuroscience.
Malin-Mayor C, Hirsch P, Guignard L, McDole K, Wan Y, Lemon WC, Kainmueller D, Keller PJ, Preibisch S, Funke J.  2023.  Automated reconstruction of whole-embryo cell lineages by learning from sparse annotations.. Nature Biotechnology. 41(1):44-49.
Santos ÁDos, Rollins DE, Hari-Gupta Y, McArthur H, Du M, Ru SYong Zi, Pidlisna K, Stranger A, Lorgat F, Lambert D et al..  2023.  Autophagy receptor NDP52 alters DNA conformation to modulate RNA polymerase II transcription.. Nature Communications. 14(1):2855.
2022
Noorman M, Hulse BK, Jayaraman V, Romani S, Hermundstad AM.  2022.  Accurate angular integration with only a handful of neurons.. bioRxiv.
J. Herron C, Hu S, Watanabe T, Nogueira AT, Liu B, Kern M, Aaron J, Taylor A, Pablo M, Chew T-L et al..  2022.  Actin nano-architecture of phagocytic podosomes. Nature Communications. 13(1):4363.
Wasmuth EV, Broeck AVanden, LaClair JR, Hoover EA, Lawrence KE, Paknejad N, Pappas K, Matthies D, Wang B, Feng W et al..  2022.  Allosteric interactions prime androgen receptor dimerization and activation.. Molecular Cell. 82(11):2021-31.
Bharathan NKrishnan, Giang W, Aaron JS, Khuon S, Chew T-L, Preibisch S, Trautman ET, Heinrich L, Bogovic J, Bennett D et al..  2022.  Architecture and dynamics of a novel desmosome-endoplasmic reticulum organelle. bioRxiv.
Malin-Mayor C, Hirsch P, Guignard L, McDole K, Wan Y, Lemon WC, Kainmueller D, Keller PJ, Preibisch S, Funke J.  2022.  Automated reconstruction of whole-embryo cell lineages by learning from sparse annotations.. Nature Biotechnology.
2021
Liu LD, Chen S, Economo MN, Li N, Svoboda K.  2021.  Accurate localization of linear probe electrodes across multiple brains.. eNeuro. 8(6):ENEURO.0241-21.2021.
Imbert PRC, Saric A, Pedram K, Bertozzi CR, Grinstein S, Freeman SA.  2021.  An Acquired and Endogenous Glycocalyx Forms a Bidirectional “Don’t Eat” and “Don’t Eat Me” Barrier to Phagocytosis. Current Biology. 31(1):77-89.e5.
Moore AS, Coscia SM, Simpson CL, Ortega FE, Wait EC, Heddleston JM, Nirschl JJ, Obara CJ, Guedes-Dias P, C Boecker A et al..  2021.  Actin cables and comet tails organize mitochondrial networks in mitosis.. Nature. 591(7851):659-664.
Govind AP, Jeyifous O, Russell TA, Yi Z, Weigel AV, Ramaprasad A, Newell L, Ramos W, Valbuena FM, Casler JC et al..  2021.  Activity-dependent Golgi satellite formation in dendrites reshapes the neuronal surface glycoproteome. bioRxiv.