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2010
Saalfeld S, Cardona A, Hartenstein V, Tomancak P..  2010.  As-rigid-as-possible mosaicking and serial section registration of large ssTEM datasets.. Bioinformatics. 26(12):i57-63.
Jaensch S, Decker M, Hyman AA, Myers EW.  2010.  Automated tracking and analysis of centrosomes in early Caenorhabditis elegans embryos.. Bioinformatics. 26(12):i13-20.
Xie J, Zhao T, Lee T, Myers E, Peng H.  2010.  Automatic neuron tracing in volumetric microscopy images with anisotropic path searching.. Medical Image Computing and Computer-Assisted Intervention: MICCAI International Conference on Medical Image Computing and Computer-Assisted Intervention. 13:472-9.
Peng H, Ruan Z, Atasoy D, Sternson S.  2010.  Automatic reconstruction of 3D neuron structures using a graph-augmented deformable model.. Bioinformatics. 26:i38-46.
Gao L, Li G, R Cooks G.  2010.  Axial CID and high pressure resonance CID in a miniature ion trap mass spectrometer using a discontinuous atmospheric pressure interface.. Journal of the American Society for Mass Spectrometry. 21(2):209-14.
2009
Meinhardt J, Sachse C, Hortschansky P, Grigorieff N, Fändrich M.  2009.  Abeta(1-40) fibril polymorphism implies diverse interaction patterns in amyloid fibrils.. Journal of Molecular Biology. 386(3):869-77.
Akselrod-Ballin A, Bock D, R Reid C, Warfield SK.  2009.  Accelerating feature based registration using the Johnson-Lindenstrauss Lemma.. Medical Image Computing and Computer-Assisted Intervention: MICCAI ... International Conference on Medical Image Computing and Computer-Assisted Intervention. 12:632-9.
Junek S, Chen T-W, Alevra M, Schild D.  2009.  Activity correlation imaging: visualizing function and structure of neuronal populations.. Biophysical Journal. 96(9):3801-9.
Ahammad P, Lobaton E, Sastry S.  2009.  Algebraic approach to recovering topological information in distributed camera networks.. ACM / IEEE International Conference on Information Processing in Sensor Networks.
Liu X, Long F, Peng H, Aerni SJ, Jiang M, Sánchez-Blanco A, Murray JI, Preston E, Mericle B, Batzoglou S et al..  2009.  Analysis of cell fate from single-cell gene expression profiles in C. elegans.. Cell. 139(3):623-33.
Gao L, Tian L-xin, Guo Y.  2009.  [Analysis on acupuncture literature in Science Citation Index (SCI) periodicals in 2007].. Zhongguo Zhen Jiu = Chinese Acupuncture & Moxibustion. 29(6):504-7.
Kainmueller D, Lamecker H, Zachow S, Hege H-C.  2009.  An articulated statistical shape model for accurate hip joint segmentation.. Conference proceedings : ... Annual International Conference of the IEEE Engineering in Medicine and Biology Society. IEEE Engineering in Medicine and Biology Society. Annual Conference. 2009:6345-51.
Dankert H, Wang L, Hoopfer ED, Anderson DJ, Perona P.  2009.  Automated monitoring and analysis of social behavior in Drosophila.. Nature Methods. 6(4):297-303.
Kainmueller D, Hege H-C, Seim H, Heller M, Zachow S.  2009.  Automatic Extraction of Anatomical Landmarks From Medical Image Data: An Evaluation of Different Methods.
Kainmueller D, Lamecker H, Seim H, Zinser M, Zachow S.  2009.  Automatic extraction of mandibular nerve and bone from cone-beam CT data.. Medical image computing and computer-assisted intervention : MICCAI ... International Conference on Medical Image Computing and Computer-Assisted Intervention. 12(Pt 2):76-83.
Xie J, Khan S, Shah M.  2009.  Automatic tracking of Escherichia coli in phase-contrast microscopy video.. IEEE Transactions on Bio-Medical Engineering. 56(2):390-9.
Mishchenko Y.  2009.  Automation of 3D reconstruction of neural tissue from large volume of conventional serial section transmission electron micrographs.. Journal of Neuroscience Methods. 176(2):276-89.
2008
Vitadalevuni SN, Kellokumpu V, Davis LS.  2008.  Action recognition using ballistic dynamics.. 2008 IEEE Conference on Computer Vision and Pattern Recognition. 2008:1-8.
Ji N, Shroff H, Zhong H, Betzig E.  2008.  Advances in the speed and resolution of light microscopy.. Current Opinion in Neurobiology. 18(6):605-16.
Ji N, Shroff H, Zhong H, Betzig E.  2008.  Advances in the speed and resolution of light microscopy. (With commentary). Current Opinion in Neurobiology. 18(6):605-16.
Andrásfalvy BK, Makara JK, Johnston D, Magee J.C..  2008.  Altered synaptic and non-synaptic properties of CA1 pyramidal neurons in Kv4.2 knockout mice.. The Journal of Physiology. 586(16):3881-92.
Neuser K, Triphan T, Mronz M, Poeck B, Strauss R.  2008.  Analysis of a spatial orientation memory in Drosophila.. Nature. 453(7199):1244-7.
Stern DL.  2008.  Aphids.. Curr Biol. 18(12):R504-5.
Saalfeld S, Tomancak P.  2008.  Automatic landmark correspondence detection for ImageJ.. Proceedings of the ImageJ User and Developer Conference.
Long F, Peng H, Liu X, Kim SK, Myers E.  2008.  Automatic recognition of cells (ARC) for 3D images of C. elegans.. Proceedings of the 2008 Conference on Computational Molecular Biology (RECOMB) (Singapore, 2008).