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Author Title [ Type(Desc)] Year
Conference Proceedings
Paraq T, Butler V, Chklovskii D.  2013.  Tracking multiple neurons on worm images.. Medical Imaging 2013: Image Processing. 8669:86692P.
Kabra M, Robie AA, Branson K.  2015.  Understanding classifier errors by examining influential neighbors.. IEEE Conference on Computer Vision and Pattern Recognition.
Ahammad P, Yeo C, Ramchandran K, Sastry S.  2007.  Unsupervised discovery of action hierarchies in large collections of activity videos.. IEEE International Workshop on Multimedia Signal Processing .
Harrison RR, Kier RJ, Leonardo A, Fotowat H, Chan R, Gabbiani F.  2010.  A wireless neural/EMG telemetry system for freely moving insects.. IEEE International Symposium on Circuits and Systems.
Journal Article
Hell SW, Sahl SJ, Bates M, Zhuang X, Heintzmann R, Booth MJ, Bewersdorf J, Shtengel G, Hess HF, Tinnefeld P.  2015.  The 2015 super-resolution microscopy roadmap.. Journal of Physics D: Applied Physics. 48:443001.
Banala S, Tkachuk AN, Patel R, Kumar P, Brown TA, Lavis LD.  2022.  2,7-Diaminobenzopyrylium Dyes Are Live-Cell Mitochondrial Stains2,7-Diaminobenzopyrylium Dyes Are Live-Cell Mitochondrial Stains. ACS Bio & Med Chem Au. 2(3):307-12.
Nikolaev YA, Ziolkowski LH, Pang S, Li W-P, Feketa VV, C. Xu S, Gracheva EO, Bagriantsev SN.  2023.  3D architecture and a bi-cellular mechanism of touch detection in mechanosensory corpuscle. Science Advances. 9(37):eadi4147.
Xie L, Dong P, Chen X, Hsieh T-HS, Banala S, De Marzio M, English BP, Qi Y, Jung SKyoung, Kieffer-Kwon K-R et al..  2020.  3D ATAC-PALM: super-resolution imaging of the accessible genome.. Nature Methods. 17(4):430-6.
Griffié J, Shlomovich L, Williamson DJ, Shannon M, Aaron J, Khuon S, Burn GL, Boelen L, Peters R, Cope AP et al..  2017.  3D Bayesian cluster analysis of super-resolution data reveals LAT recruitment to the T cell synapse.. Scientific Reports. 7(1):4077.
Long F, Peng H, Liu X, Kim SK, Myers E.  2009.  A 3D digital atlas of C. elegans and its application to single-cell analyses.. Nature Methods. 6:667-72.
Müller A, Schmidt D, C Xu S, Pang S, D'Costa JVerner, Kretschmar S, Münster C, Kurth T, Jug F, Weigert M et al..  2021.  3D FIB-SEM reconstruction of microtubule-organelle interaction in whole primary mouse β cells.. Journal of Cell Biology. 220(2)
Liu Z, Legant WR, Chen B-C, Li L, Grimm JB, Lavis LD, Betzig E, Tjian R.  2014.  3D imaging of Sox2 enhancer clusters in embryonic stem cells.. eLife. 3
Gao L, Shao L, Chen B-C, Betzig E.  2014.  3D live fluorescence imaging of cellular dynamics using Bessel beam plane illumination microscopy.. Nature Protocols. 9:1083-101.
Dworzak J, Lamecker H, von Berg J, Klinder T, Lorenz C, Kainmüller D, Seim H, Hege H-C, Zachow S.  2010.  3D reconstruction of the human rib cage from 2D projection images using a statistical shape model.. International journal of computer assisted radiology and surgery. 5(2):111-24.
Moussavi F, Heitz G, Amat F, Comolli LR, Koller D, Horowitz M.  2010.  3D segmentation of cell boundaries from whole cell cryogenic electron tomography volumes.. Journal of Structural Biology. 170(1):134-45.
Diakova AV, Makarova AA, Pang S, C Xu S, Hess H, Polilov AA.  2022.  The 3D ultrastructure of the chordotonal organs in the antenna of a microwasp remains complex although simplified.. Scientific Reports. 12(1):20172.
Schöneberg J, Dambournet D, Liu T-L, Forster R, Hockemeyer D, Betzig E, Drubin DG.  2018.  4D cell biology: big data image analytics and lattice light-sheet imaging reveal dynamics of clathrin-mediated endocytosis in stem cell derived intestinal organoids.. Molecular Biology of the Cell. :mbcE18060375.
Lu R, Tanimoto M, Koyama M, Na J.  2018.  50 Hz volumetric functional imaging with continuously adjustable depth of focus.. Biomedical Optics Express. 9(4):1964-76.
Sawaya MR, Rodriguez J, Cascio D, Collazo MJ, Shi D, Reyes FE, Hattne J, Gonen T, Eisenberg DS.  2016.  Ab initio structure determination from prion nanocrystals at atomic resolution by MicroED.. Proceedings of the National Academy of Sciences of the United States of America. 113(40):11232-6.
Bussell JJ, Yapici N, Zhang SX, Dickson BJ, Vosshall LB.  2014.  Abdominal-B neurons control Drosophila virgin female receptivity.. Current Biology. 24(14):1584-95.
Tian L, Or G, Wang Y, Shi G, Wang Y, Sun J, Papadopoulos S, Broussard G, Unger E, Deng W et al..  2018.  Aberrant calcium signaling in astrocytes inhibits neuronal excitability in a human Down syndrome stem cell model.. Cell Reports. 24(2):355-65.
Meinhardt J, Sachse C, Hortschansky P, Grigorieff N, Fändrich M.  2009.  Abeta(1-40) fibril polymorphism implies diverse interaction patterns in amyloid fibrils.. Journal of Molecular Biology. 386(3):869-77.
Kivimäe S, Martin P-M, Kapfhamer D, Ruan Y, Heberlein U, Rubenstein JLR, Cheyette BNR.  2011.  Abnormal behavior in mice mutant for the Disc1 binding partner, Dixdc1.. Translational Psychiatry. 1:e43.
Kim YJin, Grimm JB, Lee D.  2007.  Absence of the Thorpe-Ingold Eet by gem-diphenyl groups in ring-closing enyne metathesis.. Tetrahedron Letters. 48(45):7961-4.
Proskurin M, Manakov M, Karpova AY.  2023.  ACC neural ensemble dynamics are structured by strategy prevalence. eLife.