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Author Title [ Type(Desc)] Year
Book
Stern DL.  2010.  Evolution, Development, and the Predictable Genome.
Book Chapter
Aaron JS, Chew T-L.  2018.  Analysis of image similarity and relationship.. Basic Confocal Microscopy. :309-33.
Dudman JT, Cerfan CR.  2014.  The basal ganglia . The Rat Nervous System. :391-440.
Leblois A, Darshan R.  2015.  Basal ganglia: songbird models. Encyclopedia of Computational Neuroscience. :356-61.
Grimm JB, Heckman LM, Lavis LD.  2013.  The chemistry of small-molecule fluorogenic probes.. Progress in Molecular Biology and Translational Science. 113:1-34.
Jayaraman V, Laurent G.  2009.  Circuit dynamics and neural coding in the locust olfactory system.. The New Encyclopedia of Neuroscience.
Saalfeld S.  2019.  Computational methods for stitching, alignment, and artifact correction of serial section data.. Methods in Cell Biology. 152:261-276.
Bilen J, Bonini NM.  2005.  Drosophila and C. elegans models of human age-associated neurodegeneratiove diseases.. Protein Misfolding, Aggregation and Conformational Diseases.
Bilen J, Bakir U.  1998.  The effect of cross-linking on thermal inactivation of cellulases. In stability of stabilization of biocatalyst.. Progress in Biotechnology.
Li N, Guo ZV, Chen T-W, Svoboda K.  2016.  Flow of information underlying a tactile decision in mice.. Micro-, Meso- and Macro-Dynamics of the Brain.
Atasoy D, Sternson SM.  2016.  Functional and anatomical dissection of feeding circuits.. Neuroendocrinology of Appetite. :112-133.
Weigel AV, Snapp ELee.  2020.  Imaging Cellular Proteins and Structures. The Liver : Biology and Pathobiology. :965-978.
Baumann A, WIlson TG.  2011.  Molecular evolution of juvenile hormone signaling.. Gene Duplication: Book 2.
Looger LL, Segala MGPaez.  2021.  Optogenetics. Molecular Imaging: Principles and Practice, 2nd Edition.
Kent CF, Zayed A.  2015.  Population genomic and phylogenomic insights into the evolution of physiology and behaviour in social insects. Advances in Insect Physiology. :293–324.
Tebo AG, Herrero C, Aukauloo A.  2014.  Porphyrins and Metalloporphyrins at Components in Artificial Photosynthesis Research. Handbook of Porphyrin Science. 34:196–233.
Shinomiya K, Ito M.  2017.  Recent progress in the 3D reconstruction of Drosophila neural circuits.. Decoding Neural Circuit Structure and Function. :63-89.
Shao L, E Rego H.  2014.  Structured illumination microscopy (Chapter 15.). Fluorescence Microscopy: Super-resolution and other novel techniques. :213–225.
Hampel S, Seeds AM.  2017.  Targeted manipulation of neuronal activity in behaving adult flies.. Decoding Neural Circuit Structure and Function. :191-222.
Bilen J, Bonini NM.  2010.  Using Drosophila to reveal insight into protein misfolding disease.. Protein Misfolding Diseases: Current and Emerging Principles and Therapies.
Aggarwal A, Chan J, Waring AK, Negrean A, Marvin JS, Podgorski K, Looger LL.  2024.  Visualization of Glutamatergic Neurotransmission in Diverse Model Organisms with Genetically Encoded Indicators. New Technologies for Glutamate Interaction: Neurons and Glia. 2780:3–34.
Kreshuk A, Funke J, Cardona A, Hamprecht FA.  2015.  Who is talking to whom: Synaptic partner detection in anisotropic volumes of insect brain.. Medical Image Computing and Computer-Assisted Intervention -- MICCAI 2015. :661-8.
Conference Paper
Amat F, Keller PJ.  2013.  3D Haar-like elliptical features for object classification in microscopy.. International Symposium on Biomedical Imaging.
Vitadalevuni SN, Kellokumpu V, Davis LS.  2008.  Action recognition using ballistic dynamics.. 2008 IEEE Conference on Computer Vision and Pattern Recognition. 2008:1-8.
Long F, Peng H, Myers E.  2011.  Automatic 3D neuron tracing using all-paths pruning.. Conference on Intelligent Systems for Molecular Biology.