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Jackson J, Karnani MM, Zemelman BV, Burdakov D, Lee AK.  2018.  Inhibitory control of prefrontal cortex by the claustrum.. Neuron. 99(5):1029-39.
Jackson J, Smith JB, Lee AK.  2020.  The anatomy and physiology of claustrum-cortex interactions.. Annual Review of Neuroscience. 43:231-47.
Jacob V, Petreanu L, Wright N, Svoboda K, Fox K.  2012.  Regular spiking and intrinsic bursting pyramidal cells show orthogonal forms of experience-dependent plasticity in layer V of barrel cortex.. Neuron. 73(2):391-404.
Jacob LPL, Bailes SM, Williams SD, Stringer C, Lewis LD.  2024.  Distributed fMRI dynamics predict distinct EEG rhythms across sleep and wakefulness.. bioRxiv.
Jacobs DS, Allen MC, Park J, Moghaddam B.  2022.  Learning of probabilistic punishment as a model of anxiety produces changes in action but not punisher encoding in the dmPFC and VTA.. eLife. 11
A Jacquet deRus, Alpaugh M, Denis HL, Tancredi JL, Boutin M, Decaestecker J, Beauparlant C, Herrmann L, Saint-Pierre M, Parent M et al..  2023.  The contribution of inflammatory astrocytes to BBB impairments in a brain-chip model of Parkinson's disease.. Nature Communications. 14(1):3651.
Jacquet Ade Rus.  2019.  Preparation and co-culture of iPSC-derived dopaminergic neurons and astrocytes.. Current Protocols in Cell Biology. 85(1):e98.
Jacquet Ade Rus, Tancredi JL, Lemire AL, DeSantis MC, Li W-P, O’Shea EK.  2021.  The LRRK2 G2019S mutation alters astrocyte-to-neuron communication via extracellular vesicles and induces neuron atrophy in a human iPSC-derived model of Parkinson’s disease. eLife.
Jaensch S, Decker M, Hyman AA, Myers EW.  2010.  Automated tracking and analysis of centrosomes in early Caenorhabditis elegans embryos.. Bioinformatics. 26(12):i13-20.
Jain V, Seung HSebastian, Turaga SC.  2010.  Machines that learn to segment images: a crucial technology for connectomics.. Current Opinion in Neurobiology. 20(5):653-66.
Jain V, H Seung S.  2008.  Natural image denoising with convolutional networks.. Neural Information Processing Systems.
Jain V, Murray JF, Roth F, Turaga S, Zhigulin V, Briggman KL, Helmstaedter MN, Denk W, H Seung S.  2007.  Supervised learning of image restoration with convolutional networks.. IEEE 11th International Conference on Computer Vision. 2:1-8.
Jain V, Turaga SC, Briggman K, Helmstaedter MN, Denk W, Seung H.S.  2011.  Learning to Agglomerate Superpixel Hierarchies. Advances in Neural Information Processing Systems 24 (NIPS 2011). 24
Jain V, Saul LK.  2004.  Exploratory analysis and visualization of speech and music by locally linear embedding.. International Conference on Speech, Acoustics, and Signal Processing. 3:iii-984-7.
Jain V, Turaga S, Briggman K, Helmstaedter MN, Denk W, Seung S.  2011.  Learning to agglomerate superpixel hierarchies.. Neural Information Processing Systems. 24:648-56.
Jain V., Murray J.F., Roth F., Turaga S., Zhigulin V., Briggman K.L., Helmstaedter M.N., Denk W., Seung H.S..  2007.  Supervised Learning of Image Restoration with Convolutional Networks. IEEE 11th International Conference on Computer Vision, 2007. ICCV 2007.
Jain V.  2009.  Machine learning of image analysis with convolutional networks and topological constraints..
Jain V, Zhigulin V, Seung HSebastian.  2005.  Representing part-whole relationships in recurrent neural networks.. Neural Information Processing Systems. 18:563-70.
Jain V, Bollmann B, Richardson M, Berger DR, Helmstaedter MN, Briggman KL, Denk W, Bowden JB, Mendenhall JM, Abraham WC et al..  2010.  Boundary learning by optimization with topological constraints.. IEEE Conference on Computer Vision and Pattern Recognition.
Jain A, Ulman V, Mukherjee A, Prakash M, Pimpale L, Munster S, Panfilio KA, Jug F, Grill SWA, Tomancak P et al..  2019.  Regionalized tissue fluidization by an actomyosin cable is required for epithelial gap closure during insect gastrulation.. Nature Communications. 11(1):5604.
Jambor H, Surendranath V, Kalinka AT, Mejstrik P, Saalfeld S, Tomancak P.  2015.  Systematic imaging reveals features and changing localization of mRNAs in Drosophila development.. Elife. 4
Jarsky T, Mady R, Kennedy B, Spruston N.  2008.  Distribution of bursting neurons in the CA1 region and the subiculum of the rat hippocampus.. Journal of Comparative Neurology. 506(4):535-47.
Jarsky T, Roxin A, Kath WL, Spruston N.  2005.  Conditional dendritic spike propagation following distal synaptic activation of hippocampal CA1 pyramidal neurons.. Nat Neurosci. 8(12):1667-76.
Jarsky T, Cembrowski M, Logan SM, Kath WL, Riecke H, Demb JB, Singer JH.  2011.  A synaptic mechanism for retinal adaptation to luminance and contrast.. Journal of Neuroscience. 31(30):11003-15.
Jasek S, Verasztó C, Brodrick E, Shahidi R, Kazimiers T, Kerbl A, Jékely G.  2022.  Desmosomal connectomics of all somatic muscles in an annelid larva.. eLife. 11