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Labs:
Project Teams:
- Overview
- Anatomy and Histology
- Cryo-Electron Microscopy
- Electron Microscopy
- Flow Cytometry
- Fly Facility
- Gene Targeting and Transgenics
- Immortalized Cell Line Culture
- Integrative Imaging
- Janelia Experimental Technology
- Mass Spectrometry
- Media Prep
- Molecular Genomics
- Primary & iPS Cell Culture
- Project Pipeline Support
- Project Technical Resources
- Quantitative Genomics
- Scientific Computing Software
- Scientific Computing Systems
- Viral Tools
- Vivarium
2019
Wei Z, Inagaki H, Li N, Svoboda K, Druckmann S.
2019. An orderly single-trial organization of population dynamics in premotor cortex predicts behavioral variability.. Nature Communications. 10(1):216.
Campagner D, Evans MH, Chlebikova K, Colins-Rodriguez A, Loft MSE, Fox S, Pettifer D, Humphries MD, Svoboda K, Petersen RS.
2019. Prediction of choice from competing mechanosensory and choice-memory cues during active tactile decision making.. The Journal of Neuroscience : the official journal of the Society for Neuroscience. 39(20):3921-33.
Yu J, Hu H, Agmon A, Svoboda K.
2019. Principles governing the dynamics of GABAergic interneurons in the barrel cortex.. bioRxiv.
Winnubst J, Bas E, Ferreira TA, Wu Z, Economo MN, Edson P, Arthur BJ, Bruns C, Rokicki K, Schauder D et al..
2019. Reconstruction of 1,000 projection neurons reveals new cell types and organization of long-range connectivity in the mouse brain.. Cell. 179(1):268-81.
Yu J, Hu H, Agmon A, Svoboda K.
2019. Recruitment of GABAergic interneurons in the barrel cortex during active tactile behavior.. Neuron. 104(2):412-27.
Gao Z, Thomas AM, Economo MN, Abrego AM, Svoboda K, De Zeeuw CI, Li N.
2019. Response to "Fallacies of mice experiments".. Neuroinformatics.
2018
Guo KH, Yamawaki N, Svoboda K, Shepherd GMG.
2018. Anterolateral motor cortex connects with a medial subdivision of ventromedial thalamus through cell-type-specific circuits, forming an excitatory thalamo-cortico-thalamic loop via layer 1 apical tuft dendrites of layer 5B pyramidal tract type neurons.. The Journal of Neuroscience : the official journal of the Society for Neuroscience. 38(41):8787-97.
Gao Z, Davis C, Thomas AM, Economo MN, Abrego AM, Svoboda K, De Zeeuw CI, Li N.
2018. A cortico-cerebellar loop for motor planning.. Nature. 563:113-6.
Economo MN, Viswanathan S, Tasic B, Bas E, Winnubst J, Menon V, Graybuck LT, Nguyen TNghi, Smith KA, Yao Z et al..
2018. Distinct descending motor cortex pathways and their roles in movement.. Nature. 563(7729):79-84.
Vaxenburg R, Wyche I, Svoboda K, Efros AL, Hires SAndrew.
2018. Dynamic cues for whisker-based object localization: An analytical solution to vibration during active whisker touch.. PLoS Computational Biology. 14(3):e1006032.
Luo L, Callaway EM, Svoboda K.
2018. Genetic dissection of neural circuits: a decade of progress. Neuron. 98(2):256-81.
Dana H, Sun Y, Mohar B, Hulse B, Hasseman JP, Tsegaye G, Tsang A, Wong A, Patel R, Macklin JJ et al..
2018. High-performance GFP-based calcium indicators for imaging activity in neuronal populations and microcompartments.. bioRxiv.
Inagaki HK, Inagaki M, Romani S, Svoboda K.
2018. Low-dimensional and monotonic preparatory activity in mouse anterior lateral motor cortex.. The Journal of Neuroscience : the official journal of the Society for Neuroscience. 38(17):4163-85.
Tasic B, Yao Z, Graybuck LT, Smith KA, Nguyen TNghi, Bertagnolli D, Goldy J, Garren E, Economo MN, Viswanathan S et al..
2018. Shared and distinct transcriptomic cell types across neocortical areas.. Nature. 563(7729):72-78.
Dana H, Novak O, Guardado-Montesino M, Fransen JW, Hu A, Borghuis BG, Guo C, Kim DS, Svoboda K.
2018. Thy1 transgenic mice expressing the red fluorescent calcium indicator jRGECO1a for neuronal population imaging in vivo.. PloS One. 13(10):e0205444.
2017
McElvain LE, Friedman B, Karten HJ, Svoboda K, Wang F, Deschênes M, Kleinfeld D.
2017. Circuits in the rodent brainstem that control whisking in concert with other orofacial motor actions.. Neuroscience. 368:152-70.
Jun JJ, Steinmetz NA, Siegle JH, Denman DJ, Bauza M, Barbarits B, Lee AK, Anastassiou CA, Andrei A, Aydın Ç et al..
2017. Fully integrated silicon probes for high-density recording of neural activity.. Nature. 551(7679):232-236.
Guo ZV, Inagaki HK, Daie K, Druckmann S, Gerfen CR, Svoboda K.
2017. Maintenance of persistent activity in a frontal thalamocortical loop.. Nature. 545(7653):181-6.
Chen T-W, Li N, Daie K, Svoboda K.
2017. A map of anticipatory activity in mouse motor cortex.. Neuron. 94(4):866-879.e4.
Gutnisky DAdrian, Yu J, Hires SAndrew, To M-S, Bale M, Svoboda K, Golomb D.
2017. Mechanisms underlying a thalamocortical transformation during active tactile sensation.. PLoS Computational Biology. 13(6):e1005576.
Svoboda K, Li N.
2017. Neural mechanisms of movement planning: motor cortex and beyond.. Current Opinion in Neurobiology. 49:33-41.
Sun Y, Nern A, Franconville R, Dana H, Schreiter ER, Looger LL, Svoboda K, Kim DS, Hermundstad AM, Jayaraman V.
2017. Neural signatures of dynamic stimulus selection in Drosophila.. Nature Neuroscience. 20(8):1104-13.
2016
Li N, Guo ZV, Chen T-W, Svoboda K.
2016. Flow of information underlying a tactile decision in mice.. Micro-, Meso- and Macro-Dynamics of the Brain.