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C
Scheffer LK, C Xu S, Januszewski M, Lu Z, Takemura S-ya, Hayworth KJ, Huang GB, Shinomiya K, Maitlin-Shepard J, Berg S et al..  2020.  A connectome and analysis of the adult Drosophila central brain.. Elife. 9
Takemura S-ya, Aso Y, Hige T, Wong AM, Lu Z, C Xu S, Rivlin PK, Hess HF, Zhao T, Parag T et al..  2017.  A connectome of a learning and memory center in the adult Drosophila brain.. eLife. 6:e26975.
I
Berg S, Kutra D, Kroeger T, Straehle CN, Kausler BX, Haubold C, Schiegg M, Ales J, Beier T, Rudy M et al..  2019.  ilastik: interactive machine learning for (bio)image analysis.. Nature Methods. 16:1226-32.
M
Beier T, Pape C, Rahaman N, Prange T, Berg S, Bock DD, Cardona A, Knott GW, Plaza SM, Scheffer LK et al..  2017.  Multicut brings automated neurite segmentation closer to human performance.. Nature Methods. 14(2):101-102.
N
Plaza SM, Clements J, Dolafi T, Umayam L, Neubarth NN, Scheffer LK, Berg S.  2022.  neuPrint: An open access tool for EM connectomics.. Frontiers in Neuroinformatics. 16:896292.
R
Holcomb PS, Morehead M, Doretto G, Chen P, Berg S, Plaza S, Spirou G.  2016.  Rapid and semi-automated extraction of neuronal cell bodies and nuclei from electron microscopy image stacks.. Methods in molecular biology (Clifton, N.J.). 1427:277-90.
S
Haubold C, Schiegg M, Kreshuk A, Berg S, Koethe U, Hamprecht FA.  2016.  Segmenting and Tracking Multiple Dividing Targets Using ilastik.. Advances in anatomy, embryology, and cell biology. 219:199-229.