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Labs:
Project Teams:
- Overview
- Anatomy and Histology
- Cryo-Electron Microscopy
- Electron Microscopy
- Flow Cytometry
- Fly Facility
- Gene Targeting and Transgenics
- Immortalized Cell Line Culture
- Integrative Imaging
- Janelia Experimental Technology
- Mass Spectrometry
- Media Prep
- Molecular Genomics
- Primary & iPS Cell Culture
- Project Pipeline Support
- Project Technical Resources
- Quantitative Genomics
- Scientific Computing Software
- Scientific Computing Systems
- Viral Tools
- Vivarium
3
A
Liu X, Long F, Peng H, Aerni SJ, Jiang M, Sánchez-Blanco A, Murray JI, Preston E, Mericle B, Batzoglou S et al..
2009. Analysis of cell fate from single-cell gene expression profiles in C. elegans.. Cell. 139(3):623-33.
Heckscher ES, Long F, Layden MJ, Chuang C-H, Manning L, Richart J, Pearson JC, Crews ST, Peng H, Myers E et al..
2014. Atlas-builder software and the eNeuro atlas: resources for developmental biology and neuroscience.. Development. 141(12):2524-32.
Zhao T, Xie J, Amat F, Clack N, Ahammad P, Peng H, Long F, Myers E.
2011. Automated reconstruction of neuronal morphology based on local geometrical and global structural models.. Neuroinformatics. 9(2-3):247-61.
Long F, Peng H, Myers E.
2011. Automatic 3D neuron tracing using all-paths pruning.. Conference on Intelligent Systems for Molecular Biology.
Peng H, Long F, Zhou J, Leung G, Eisen MB, Myers EW.
2007. Automatic image analysis for gene expression patterns of fly embryos.. BMC Cell Biology. 8(Supplement 1):S7.
Long F, Peng H, Liu X, Kim SK, Myers E.
2008. Automatic recognition of cells (ARC) for 3D images of C. elegans.. Proceedings of the 2008 Conference on Computational Molecular Biology (RECOMB) (Singapore, 2008).
Long F, Peng H, Myers E.
2007. Automatic segmentation of nuclei in 3D microscopy images of C. elegans.. 2007 4TH IEEE International Symposium on Biomedical Imaging: Macro to Nano, VOLS 1-3. :536-9.
B
Wan Y, Long F, Qu L, Xiao H, Hawrylycz M, Myers EW, Peng H.
2015. BlastNeuron for automated comparison, retrieval and clustering of 3D neuron morphologies.. Neuroinformatics. 13(4):487-99.
C
Yu H-H, Awasaki T, Schroeder MDavid, Long F, Yang JS, He Y, Ding P, Kao J-C, Wu GYueh-Yi, Peng H et al..
2013. Clonal development and organization of the adult Drosophila central brain.. Current biology : CB. 23:633-43.
F
G
Jenett A, Rubin GM, Ngo T-TB, Shepherd D, Murphy C, Dionne H, Pfeiffer BD, Cavallaro A, Hall D, Jeter J et al..
2012. A GAL4-driver line resource for Drosophila neurobiology.. Cell Reports. 2(4):991-1001.
P
Long F, Peng H, Sudar D, Lelièvre SA, Knowles DW.
2007. Phenotype clustering of breast epithelial cells in confocal images based on nuclear protein distribution analysis.. BMC Cell Biology. 8 (Suppl 1):S3.
S
Lam SChun Benny, Ruan Z, Zhao T, Long F, Jenett A, Simpson J, Myers EW, Peng H.
2010. Segmentation of center brains and optic lobes in 3D confocal images of adult fruit fly brains.. Methods. 50(2):63-9.
Qu L, Long F, Liu X, Kim S, Myers E, Peng H.
2011. Simultaneous recognition and segmentation of cells: application in C. elegans.. Bioinformatics. 27(20):2895-902.
Peng H, Long F, Liu X, Kim SK, Myers EW.
2008. Straightening caenorhabditis elegans images.. Bioinformatics. 24:234-42.
Peng H, Long F, Myers EW.
2007. Straightening worm images.. 2007 4TH IEEE International Symposium on Biomedical Imagin : Macro to Nano, VOLS 1-3. :292-5.
Siegle JH, Jia X, Durand S, Gale S, Bennett C, Graddis N, Heller G, Ramirez TK, Choi H, Luviano JA et al..
2021. Survey of spiking in the mouse visual system reveals functional hierarchy.. Nature. 592(7852):86-92(7852):86-92.
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Peng H, Ruan Z, Long F, Simpson JH, Myers EW.
2010. VAA3D enables real-time 3D visualization and quantitative analysis of large-scale biological image data sets.. Nature Biotechnology. 28:348-53.
Peng H, Long F, Myers EW.
2009. VANO: a volume-object image annotation system.. Bioinformatics. 25:695-7.