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Source data, simulation code, other resources

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Source data and/or simulation code is available from the following publications. Links include direct downloads as well as redirects to Figshare, GEO, Github, or ModelDB.

Single excitatory axons form clustered synapses onto CA1 pyramidal cell dendrites

Bloss EB, Cembrowski MS, Karsh B, Colonell J, Fetter RD, Spruston N

Nature Neuroscience, 2018. doi: 10.1038/s41593-018-0084-6

Paper pdf  | Nat. Neurosci.   | Simulation Code   | Source data   | Hi-res images

Hipposeq: a comprehensive RNA-seq database of gene expression in hippocampal principal neurons

Cembrowski MS, Wang L, Sugino K, Shields BC, Spruston N

eLife, 5:e14997, 2016. doi: 10.7554/eLife.14997

Paper pdf  |  eLife   |  Hipposeq website   |  GEO data   |  Analysis scripts

Dendrites book: Dendritic integration chapter

Spruston N, Stuart G, Häusser M

Oxford University Press, 2016 (3ed), 2008 (2ed), 1999 (1ed)

Chapter 12 pdf  (3ed)  |  Simulation code  |  Book on Amazon  |  Book on OUP

Structured dendritic inhibition supports branch-selective integration in CA1 pyramidal cells.

Bloss EB, Cembrowski MS, Karsh B, Colonell J, Fetter RD, Spruston N

Neuron 89, 1016-1030, 2016. doi: 10.1016/j.neuron.2016.01.029.

Paper pdf  | Simulation code  | Source data  | High-res images

Spatial gene-expression gradients underlie prominent heterogeneity of CA1 pyramidal neurons.

Cembrowski MS, Bachman JL, Wang L, Sugino K, Shields BC, Spruston N

Neuron 89, 351-368, 2016. doi: 10.1016/j.neuron.2015.12.013.

Paper pdf  | Preview  | Analysis scripts  | Ephys data  | High-res images

Dendritic sodium spikes are required for long-term potentiation at distal synapses on hippocampal pyramidal neurons

Kim Y, Hsu CL, Cembrowski MS, Mensh BD, Spruston N

eLife 2015;4:e06414. doi: 10.7554/eLife.06414.

Paper pdf   | Simulation code   | Source data            

Balanced synaptic impact via distance-dependent synapse distribution and complementary expression of AMPARs and NMDARs in hippocampal dendrites

Menon V, Musial TF, Liu A, Katz Y, Kath WL, Spruston N

Neuron 80, 1451-63, 2013

Paper pdf  | Suppl. material    | Simulation code  | Movies

Synapse distribution suggests a two-stage model of dendritic integration in CA1 pyramidal neurons

Katz Y, Menon V, Nicholson DA, Geinisman Y, Kath WL, Spruston N

Neuron 63, 171-77, 2009

Paper pdf   | Simulation videos   | Simulation code

A state-mutating genetic algorithm to design ion-channel models         

Menon V, Spruston N, Kath WL

Proceedings of the National Academy of Sciences 106, 16829-34, 2009

Paper pdf  | Suppl. material   | Simulation code  | Movie

Conditional dendritic spike propagation following distal synaptic activation of hippocampal CA1 pyramidal neurons

Jarsky T, Roxin A, Kath WL, Spruston N

Nature Neuroscience 8, 1667-76, 2005

Paper pdf  | Suppl. material    | Simulation code

Factors mediating powerful voltage attenuation along CA1 pyramidal neuron dendrites

Golding NL, Mickus TJ, Katz, Y, Kath WL, Spruston N

Journal of Physiology 568, 69-82, 2005

Paper pdf   | Simulation code

Dichotomy of action-potential backpropagation in CA1 pyramidal neuron dendrites

Golding NL, Kath WL, Spruston N

Journal of Neurophysiology 86, 2998-3010, 2001

Paper pdf   | Simulation video   | Simulation code